Syngnathus scovelli (Gulf pipefish): 125992250
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Entry
125992250 CDS
T08785
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
sscv
Syngnathus scovelli (Gulf pipefish)
Brite
KEGG Orthology (KO) [BR:
sscv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sscv03009
]
125992250
Ribosome biogenesis [BR:
sscv03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
125992250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
RLI
AAA_21
SMC_N
Fer4
Fer4_6
AAA_22
AAA
AAA_16
AAA_15
RsgA_GTPase
AAA_29
Fer4_2
NACHT
VapE-like_dom
nSTAND3
Fer4_10
AAA_23
Fer4_9
Rad17
TsaE
Fer4_4
AAA_30
Fer4_21
Fer4_16
SRP54
Fer4_7
Fer4_3
AAA_7
AAA_19
Motif
Other DBs
NCBI-GeneID:
125992250
NCBI-ProteinID:
XP_049617077
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADKNTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIVWISESLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANSFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKFDNPPDWQEILTYFRGSELQNYFTKILEDDLRAIVKPQYVDQIPKTV
KGSVGAILSRKDDMDTQNLVCQQLDLSHLRERNVEDLSGGELQRFACAVVCIQRADIFMF
DEPSSYLDVKQRLKAAITIRSLITPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRETSLVFKVAETANEEEVKRLRHYQYPNMAKTMGEF
TLEIKGGEFTDSEIMVMLGENGTGKTTFIRMLAGGLKPDGGGDVPILNVSYKPQTISPKF
KGSVRALLHEKIRDAYTHPQFITDVMKPMQIESIIDQDVQNLSGGELQRVALTLCLGKPA
DVYLIDEPSAYLDSEQRLMAARVIKRYILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KHTAANTPQGLLAGMNRFLSLLEITFRRDPNNFRPRINKLNSIKDTEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaaaacaccaggatcgccatcgtcaaccatgacaaatgcaaacccaagaaa
tgtcggcaagagtgcaagaagagctgcccggtggtccgcatgggcaagctgtgtatcgag
gtgaccccgcagagtaagatcgtgtggatttcggagtcgctttgcatcggctgcggaata
tgcatcaagaaatgtccgtttggggcgctgtccatcgtcaacctgcccagtaacctggag
aaggaaaccacacacagatactgcgccaattccttcaaactgcaccggctgcccattccg
agaccgggcgaggttctggggctggtggggaccaacggtattggcaagtccacggcgctc
aagattctggcgggcaaacagaaacccaacttgggaaagtttgataatcctccagattgg
caggagatcctgacgtactttcgtggctcggagttgcagaattacttcaccaaaatcttg
gaggacgacctgcgcgccatcgtcaagccacagtacgtggaccagatcccaaagaccgtc
aagggatcggtcggcgccatcctgagcagaaaagatgacatggacacacagaacttggtt
tgccagcaactcgatttgagtcacctgcgcgagaggaatgtggaggacctgtcgggagga
gagctacagaggttcgcctgcgccgtcgtctgtatccagagagccgacatttttatgttt
gatgagccgtccagctatctggatgtcaaacagaggctgaaggctgccatcaccatccgc
tcgctcatcacgccagacaggtacatcatcgtagtggaacacgacttgagcgtgttggat
tacttgtctgacttcatctgctgcctgtacggcgtaccgagtgcctacggagtggtcacc
atgcccttcagcgtgcgggagggcatcaacatcttcctggacggttacgttcccacggag
aacctgcgcttccgcgagacctccctggtgttcaaagtggccgaaacggccaacgaggag
gaagttaagcggcttcggcactaccagtatcccaacatggccaaaaccatgggcgagttc
accctggagatcaagggaggggagttcaccgactcggaaatcatggtcatgctgggggag
aacggcacaggaaaaaccaccttcatcaggatgttagccggaggactcaaaccggatggc
ggaggtgatgtgcccatcctcaacgtgagctacaagcctcagaccatcagtcctaagttc
aagggcagcgtccgtgctcttctgcatgaaaagatccgagacgcctacacgcaccctcag
ttcatcacggacgtcatgaagcccatgcagattgagagcatcatcgaccaggacgtccag
aacctttcaggtggtgagcttcagagagttgcgcttaccttgtgtttgggcaaaccggcc
gacgtctacctcatcgacgaaccctccgcctaccttgattccgagcagcggttgatggca
gccagggtcatcaagaggtacatcctgcacgccaagaagacggcgttcgtggtggagcac
gactttatcatggccacgtacctagcggaccgcgtcatcgtctttgacgggattccctcc
aaacacacggccgccaacactccacagggtctcctggcgggcatgaaccgctttctgtct
ctgctggagataacgtttcgtagagatcccaacaacttccggccacgcatcaacaagctc
aattccatcaaggacacggaacagaagaagagcgggaactacttctttctggatgactag
DBGET
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