Shewanella sediminis: Ssed_0016
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Entry
Ssed_0016 CDS
T00596
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
sse
Shewanella sediminis
Pathway
sse03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ssed_0016
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sse03400
]
Ssed_0016
Enzymes [BR:
sse01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
Ssed_0016
DNA repair and recombination proteins [BR:
sse03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Ssed_0016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
ABV34629
UniProt:
A8FP56
LinkDB
All DBs
Position
18917..19507
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AA seq
196 aa
AA seq
DB search
MTMEMQRCSWVGADDLYQAYHDKVWGRPVYDSQELFAKLCLDGQQAGLSWITILKKQQNY
EAAFANFDPVIIAKFDDEKVEALLQDKGIVRNRLKVNSIIKNARGYISYTEQGNDFSEFL
WSFVGGTPIVNTFKTMAEVPAQTPESEEMSKALKKLGFNFVGPTICYAFMQAVGMVNDHT
TDCFCYDLHLEGSEGE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggaaatgcaacgttgtagttgggttggggccgatgacctatatcaggcgtat
cacgataaggtatgggggcgtcccgtttatgatagccaggagctgtttgctaagctctgt
ttagatggtcaacaggcgggtctatcttggatcactatcctcaagaaacagcaaaattat
gaggccgcattcgctaacttcgatccggtgattatagcgaaatttgacgatgaaaaagtt
gaagcgctacttcaggacaaaggaatagtgcgtaacaggctaaaggtaaactcgataatc
aaaaacgcccgcggctatatcagctatacagaacaggggaatgatttttccgaatttcta
tggagcttcgtcggtgggacacccatagtgaacacattcaagactatggcagaggttcct
gcgcagacgccagaatcggaggagatgtctaaggcattgaaaaagcttgggtttaacttt
gtcggccccaccatctgttacgcatttatgcaggccgttggcatggttaacgatcataca
acagattgtttttgttatgatttacatctagaaggatccgagggagaataa
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