Shewanella sediminis: Ssed_0253
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Entry
Ssed_0253 CDS
T00596
Name
(GenBank) transcriptional regulator, LysR family
Organism
sse
Shewanella sediminis
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
MarR_2
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ABV34866
UniProt:
A8FPU3
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Position
complement(286268..287230)
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AA seq
320 aa
AA seq
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MNLDNLARIDLNLLVILQVLLEEQSVTRAASRLHLSQSALSKSLNRLRDTLDDPLFIRTA
HGLKPTAHAVQLSDKLPSLLENLSQLTQPPTFTPASSDRKFSFAMVESAYETLLPYFIGP
LLSNAPNLRLDSYGWMGKSIQDLQKGQVDFGIAGRDLHPKSNVHMDRLPDGIAHQLLFTD
HQICLVREEHPILSAITTGNWNLDIYLEMSHVQVRCEGNEWWALDYHLAEQGHRRRLSTT
VPDFYGAASVCAHSDLIFTVPSSFARHAKKLYPLVELPLPFDFIPLAYVLLWHERNNDEP
GHRWMRETICKSVADAFSNI
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgataacctggctagaatcgatctgaacctgctggtgatcctgcaagtacta
ctcgaggaacaaagtgtcacccgagcagccagtcgactccacctgagtcagtcggcactg
agtaagagcctcaaccggttacgggataccttagatgacccactttttattcgtaccgct
catgggttaaagccgactgctcacgcagtacaactcagcgataaactgccaagcctactg
gaaaatctatcacaactgactcagccgcccacttttactcctgcgagcagcgatcgcaaa
ttctcttttgctatggtcgagagtgcctatgagactctacttccctactttatcgggcca
ttgctaagcaatgcgcctaacttaaggctggatagctatggttggatggggaaatcgata
caagatctgcaaaaaggtcaggtagattttggcattgccgggcgcgatctccaccccaaa
tcaaacgttcatatggatcgcctacctgatggcattgcccatcagttactttttaccgat
catcaaatatgtctggtcagagaggagcaccccatcctctctgccatcacgacaggcaac
tggaacctggatatctacctagagatgtcacatgtacaagttcgttgcgaagggaatgaa
tggtgggctttagattatcatctggcagagcaaggtcataggcggcgacttagcacaacc
gttcctgatttttatggggctgcaagtgtctgtgcccacagcgatctgatctttaccgta
ccctcaagctttgctcgtcacgctaaaaagttatacccattggttgagctaccgctacct
tttgactttatccctttagcctatgtactcctgtggcatgaacgtaataatgacgaaccc
ggacacaggtggatgcgagaaaccatctgcaagagtgttgccgatgcgtttagtaatatt
tag
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