Shewanella sediminis: Ssed_1256
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Entry
Ssed_1256 CDS
T00596
Name
(GenBank) transporter, hydrophobe/amphiphile efflux-1 (HAE1) family
KO
K18138
multidrug efflux pump
Organism
sse
Shewanella sediminis
Pathway
sse01501
beta-Lactam resistance
sse01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ssed_1256
01503 Cationic antimicrobial peptide (CAMP) resistance
Ssed_1256
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1256
01504 Antimicrobial resistance genes [BR:
sse01504
]
Ssed_1256
Transporters [BR:
sse02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
Ssed_1256
Antimicrobial resistance genes [BR:
sse01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ssed_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
ABV35867
UniProt:
A8FSP4
LinkDB
All DBs
Position
1488469..1491585
Genome browser
AA seq
1038 aa
AA seq
DB search
MISEFFINRPKFAFVISTVLTLVGLISIPILSVSEFPEIAPPQINVSTSYSGASAGVVKD
TIAQPLEAEVNGVEGMLYMESKSANDGSYALNVTFEVGTDADMAQVKVQNRVQQAMPRLP
EEVKRQGVKVEKQSPNMLMVVNLVSPNETFDSLFITNYAGLNIKDALARQNGVSKVQVIG
SLDYAIRIWLDPNQMASFGVTAKDVIAALQEQNIQVAAGRIGAAPVDPDQQFQYTLQTKG
RLKDPQEFKDVMIRANNDGSKVVVSDVARVELGSQTYDAQGKLNNKPSAIIAVYQSPDAN
ALEVAAGIKTEMAKLSERFPTDLEYEVLYDTTEFVETSITEVVQTLFISISLVVLVVYIF
LQDARSTLVPGIAIPVSLIGTFAFLLLFGMSINTVSLFALILAIGIVVDDAIVVVENVTR
LMQDEGLSPKEATSKAMKEVTGPIIATTLVLLAVFAPTAVMPGITGQMYAQFSVTICIAV
LISSINALTLSPALCASLLRAPKQHETGFHASFNKYFERFTGKYMGLVSSLTRKLSLVVV
VYVCLIAVTGGVAKILPSGFVPMEDKKAFMVDIQLPDGASLNRTEEVMKELVELTLAEPG
VENVIHASGFSILTGSVSSNGGLMIVTLSSWEERDTPDMVEAAIVAKLQVKYAANPSVKA
MAFSLPPIPGVGSVGGFEFVLQDTQGRSPQELASVMRALIMEANSQPEIAMAFSNFRADV
PQMYVDVDRDKAKALGISLNEIFTTMQTMLGSMYVNDFNRYGKVFRVIVQAEGEFRNSDR
DISSFYVRSASGEMVPLSTLVTVTPILGPDVMNSYNMFSSTTINGFPAAGFSSGDAIKAM
ERAAEQSLPTGYSYQWTGQTFQEIKAGNLAPLIFGLALVFTYLFLVAQYESWTIPFAVML
AVPIALLGAFLNIWLMGTDLNLYAQIGLVLLIGLACKNAILIVEFAKQLREEGKSILDAG
ETAARLRFRAVLMTAFSFLLGVLPLVIATGAGAGSRRALGYSVFGGMLAATIVGTLLVPV
FYVMMQKLRERVKGEAKA
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgattagtgaattctttattaacaggcctaagttcgcctttgttatttctactgtgttg
accttggttggacttatctccattcctattttatcagtgtctgagtttcctgaaatagcg
ccacctcaaattaacgtgtctacgagttattccggtgcgagtgccggtgtggttaaagat
accatagctcagccactcgaggctgaggtcaatggcgtcgaaggtatgctctatatggag
tctaagagtgccaacgatggaagttacgcattaaatgtaacattcgaagtgggcacagat
gccgatatggcgcaggttaaagtacaaaacagagtgcagcaggcgatgccgcgtctgccc
gaagaggttaaacgtcagggggttaaagtcgagaaacagagccccaatatgttgatggtg
gtgaatctggtttcccccaacgagaccttcgactcgctgtttattactaactatgccgga
ttgaatatcaaggatgcgcttgctcgtcaaaatggtgtctctaaggttcaagtgatcggc
tcgctcgattacgcaattcggatctggctcgatcccaatcaaatggcaagctttggtgtg
acagcaaaagatgtgattgctgctttgcaggagcaaaatatccaagttgcggctggacgc
atcggtgctgcgcctgtggatccagatcagcagtttcagtacaccttacaaactaaaggg
cgcttgaaagatccacaggagtttaaggatgttatgatccgagcgaacaacgatggttcc
aaagtcgttgtcagcgatgtggctcgtgtcgagttaggttctcaaacctatgatgcacaa
ggtaagttaaacaataagccttcggcaattattgctgtttatcagtcacctgatgctaat
gcattggaagttgccgccggaattaaaaccgagatggctaagttgtcagagcgttttcca
acggatctggaatacgaagtgctttatgacacgactgagttcgttgaaacttcgattaca
gaggtagtacagaccctcttcatctctatctcgctggttgtattagttgtttatatcttc
ttgcaggatgcacgctcgactctggttcccggaattgcgattccggtttccttaattggt
acctttgcgttcctgctcttgtttggcatgagcattaataccgtgtctctgttcgcattg
atcttagccattggtattgtggtagatgatgcgatcgtggtggtagagaacgtgactcgt
ctgatgcaggatgaaggtctctctccaaaggaggcgacatctaaggcgatgaaagaggtt
accggccctattattgcgaccaccttggtgttgcttgctgtttttgctcccacggctgtc
atgcctggtattaccggacagatgtatgcacagttctctgtgaccatctgtatcgctgta
cttatctcctcaataaacgcactaaccttgagtccggcgctatgtgcctcgttactcaga
gcacctaaacagcatgaaacaggttttcatgcctcgtttaataaatactttgaacgtttc
accggtaagtacatggggctcgtctcatcattgacccgtaagctgtctttagtggttgtg
gtttatgtctgtttaattgccgtcacgggcggagtggcaaaaatcttaccttcaggcttt
gtgcctatggaagataagaaagcctttatggtcgatatccaacttcccgatggtgcatca
cttaaccgtacagaagaggtgatgaaagagttagtcgagttgactctggctgaacctggt
gttgagaatgtgatccacgccagtggtttcagtatcttaaccggttcagtatcgtccaat
ggtggcttgatgatcgttaccctctcctcctgggaggagcgagatactccagatatggtc
gaggcggctatcgtggctaagcttcaggtcaaatatgcagctaacccttcggtgaaagcc
atggcgttctcattgccgccaattccgggggtgggtagtgtgggaggatttgagtttgtg
ctgcaagatactcaaggtcgctcacctcaagagttggcttctgttatgcgagccctgata
atggaagctaattcgcagccagaaatcgccatggcatttagtaacttccgtgccgatgtt
ccgcagatgtatgtggatgtcgatagggataaagccaaggcgttagggatctcattgaac
gagatattcacaactatgcagaccatgcttgggtctatgtatgtgaatgactttaaccgt
tacggtaaggtgtttagagttattgtgcaggccgaaggtgagtttcgtaattcggatagg
gatatttccagtttctacgtgcgctcggcaagtggtgagatggtgcctctgagcacgctg
gtaacggtgacgcctatcttaggccccgatgtgatgaactcatacaatatgtttagttcg
actaccattaacggcttcccggcggcagggtttagctcgggggacgcgattaaggcgatg
gagcgtgcggcagagcagagtctgcctacaggttatagctatcaatggaccggtcagacg
tttcaggagattaaggcgggcaatttagcgccacttatctttggtttggcgttagtgttt
acttatcttttcctggtggctcagtatgagagctggacaattccgtttgcggtaatgctg
gcggtacctattgcattacttggggccttccttaatatttggctgatgggaacagacctg
aacctctatgctcagattggtttggtgctcttgattggactggcttgtaagaatgcaatc
ttgatcgttgaatttgcaaaacagctaagagaagaggggaagagtattctcgatgcgggt
gaaacggctgccagactgcgttttcgtgcggtattaatgacagccttctctttcctgctc
ggtgtgcttcctctggtcattgcgactggtgctggagcggggagtcgtcgtgctctgggt
tactcagtgttcggcggcatgcttgcagcgactattgttggtactctgctggttcctgtg
ttttatgtgatgatgcaaaagctcagagagcgagtgaaaggtgaggcgaaagcttag
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integrated database retrieval system
