Shewanella sediminis: Ssed_1405
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Entry
Ssed_1405 CDS
T00596
Name
(GenBank) 4Fe-4S ferredoxin, iron-sulfur binding domain protein
KO
K07307
anaerobic dimethyl sulfoxide reductase subunit B
Organism
sse
Shewanella sediminis
Pathway
sse00920
Sulfur metabolism
sse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
Ssed_1405
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_1405
Transporters [BR:
sse02000
]
Other transporters
Transmembrane electron carriers [TC:
5
]
Ssed_1405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fer4_11
Fer4_7
Fer4_2
Fer4_6
Fer4
Fer4_9
Fer4_10
Fer4_4
Fer4_3
Fer4_21
Fer4_8
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
ABV36016
UniProt:
A8FT43
LinkDB
All DBs
Position
1667412..1668029
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AA seq
205 aa
AA seq
DB search
MTDKIQYGFFVDTTKCTGCKTCQVACKDRSDLSLGVKWRRVYEYGGGSWTENEDGTFNNN
VFAHYTSISCNHCSHPVCVKACPTGACHKRKSDGLVHIEASLCVGCQSCSRACPYDAPQF
DSERGVMTKCDGCYDRLEQGLNPTCVDSCPLRALEFGPIDELRNKHGDNADIQPLPSSDI
TSPNLIIKVNRNAQPGGEILNEFEV
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaattcaatacggcttttttgtcgacaccaccaagtgtaccggctgcaaa
acctgccaggtggcatgtaaagaccgcagtgatctgtctttgggagtaaagtggcgccgc
gtgtatgaatatggtggtggcagctggaccgaaaatgaggatggtacctttaataacaat
gtgtttgctcactacacctcaatctcgtgtaaccactgctctcatcctgtgtgcgtcaaa
gcatgccctaccggtgcttgccataagcgcaagagcgatgggctggtgcatatcgaagcc
agtctctgcgtaggctgtcaaagctgttcacgtgcttgtccctatgatgcacctcaattc
gacagcgagcgtggcgtgatgaccaaatgtgatggttgctacgaccgtctggagcaaggg
ttaaaccctacctgtgtcgattcgtgccccctgcgggctctggagtttgggccaatcgat
gagctgcgcaacaagcatggtgataatgccgatattcagcctcttccgagttctgacatc
acctcgccaaacctgatcattaaggttaatcgcaatgctcagccgggcggagagatactg
aatgagtttgaggtttaa
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