Shewanella sediminis: Ssed_3295
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Entry
Ssed_3295 CDS
T00596
Name
(GenBank) Fmu (Sun) domain protein
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sse03009
]
Ssed_3295
Enzymes [BR:
sse01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
Ssed_3295
Ribosome biogenesis [BR:
sse03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Ssed_3295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Methyltransf_25
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ABV37899
UniProt:
A8FYH6
LinkDB
All DBs
Position
4003559..4004938
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AA seq
459 aa
AA seq
DB search
MNSSQSNSTPKDLLSITDVQAETTSQKRALSYANTIYLLFHQVMDKQQPADRVVGEYFRV
NKKHGSKDRRVIRESLFAMFRWWGWLNKFSDAQSSQAWFSMLTATATMESHAWHDIIQAW
GEFSGIDFSGSSYNQDAPSTAFPCVSSKCEWMNAQFAPLTFDTDELVPGWFWQVCPIEDA
AQRLAMVESLSSRPPIWSRAQNIDTTTAIEQLNLVDVPATASDYFSDTINLGHKSINLNG
LSLYKEGKLEIQDLGSQVIGHICAPKENDLWWDTCSGAGGKSLQLRSLMLQQSSQSTGSI
IASDIRRKPLEELAKRAKRAGFKGITVSPWKSDELPVPHAHFDGVLVDAPCSCTGTWRRN
PDMRWIDAVEVVQDKPELQLDILRRSSQAVKRGGTLVYATCSLSPVENEEVVNAFLAEQS
EFTLESITHPFTGNETEMLTVFPFEADTDGMFVARMRRS
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgaactcgagccaaagtaactccaccccaaaagacttactctcaataacagatgtacaa
gccgagaccacgtctcagaagcgggcactgagctacgccaataccatatatctgctgttt
catcaggttatggataagcagcaacccgccgatcgtgtcgtaggcgaatatttcagagtc
aataagaagcacggttctaaagaccgacgcgtgatccgtgagagtctgtttgccatgttc
cgttggtggggctggttaaacaaattcagcgatgctcagtcgagtcaagcctggttctct
atgctcaccgcaaccgcgaccatggaatcacacgcctggcatgacataattcaagcctgg
ggagagttttcaggtatcgacttttctggctctagctataaccaggatgcgccatcgact
gcattcccttgcgtgagcagcaagtgtgagtggatgaatgcacaatttgccccactgaca
tttgataccgatgagctggtaccggggtggttctggcaggtttgtccgatcgaagatgcg
gcgcagcgattggctatggtcgagtctctgtcatcacgccctcctatctggagccgcgct
cagaatatcgatacaactaccgccattgagcagctcaatctggtcgatgttccggcaaca
gccagtgactatttcagtgacacgattaacttaggccataagagcattaacttgaatggc
ttatctctgtataaagagggcaagctggagatacaggatcttggctctcaggtgattggc
catatctgtgcccccaaagagaatgacctttggtgggacacctgtagcggcgccggaggg
aaaagcctacagctcagatctctgatgcttcagcagagctctcaatccactggtagtatc
atagcatccgatatacgtcgcaaacccttagaggagttagccaagcgagctaagcgagcc
ggctttaaggggatcactgtttccccgtggaaatccgatgagctgccggtacctcacgcc
catttcgatggcgtgctcgtcgatgcgccttgcagctgcaccggcacctggcgtcgaaat
ccggatatgcgctggatagatgccgtggaagtggtacaagacaaacctgagttgcaactc
gatattctgcgcagaagcagtcaggcagttaaacgtggcggcactttagtctatgccacc
tgctcactctctcccgttgagaatgaagaggtggttaatgcctttttagccgaacagagt
gaattcaccttagagtcaatcactcacccgttcaccggcaacgaaacagagatgctaacc
gtattcccgttcgaagccgatacagacggtatgtttgtggcacgaatgagacgaagctaa
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