Shewanella sediminis: Ssed_4157
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Entry
Ssed_4157 CDS
T00596
Name
(GenBank) TonB-dependent copper receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_4157
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_4157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
MipA
OMP_b-brl_3
Omp85
OMP_b-brl_2
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ABV38761
UniProt:
A8G0Y8
LinkDB
All DBs
Position
5110336..5112339
Genome browser
AA seq
667 aa
AA seq
DB search
MKHKTITLASVITATMSIPTLVFPLTALAEDEPRDCGDRRCDDYIVITGDLMREPTKVVT
DPKKPRLPLPSYDGAGFLKTIPGFSIGRKGGAGGDPSLRGMGGSRISIVDDGQHVYGTCG
GRMDPPTAYIYPEAYDSITVIKGPQTVKYGPVGSAGTVLFEKDRHSFVEPGVEGRASVTG
GSFERQDYIVELKAGDETHYLDLDVNQSSSDHYQDGDGNTVQSSYDRNNYNIALGWTPTD
TSVIELAYGKSDGEAEYADRANKARVINNENVTLLTQFEFDSDLIREIEFQAYTNKNDHI
MDQFDQGVNSGVNVRRKTSGGHFWLELTPSESLEATLGVDYMQSTHEGRGINPEFDNGLD
DLLSKPFKDNMRYENMGIFIEADYALGGGNLLSGLRFDHWDSELFVAQTGKRSDDLISGF
IRYEYLNGNNQYYLGTGHAQRIPDYWEIMKASPDNLSTKAFDLEPEKTTQLDIGWIYQAN
IEISTSLYYGKVDDYILVDSNTSKTSAYNIDATIWGGEVGITYPFTEQWSAQTTLSYSHG
ENDTQDTPLGQVSPMEGRVSVNYEGEEWTAGLFWRVVAAQDRVSIGQGNISGQDLAESSG
FGTLAINGSWKHGDVVLVSFGIENLFDITYAEHVSRSGAGNDIPGSEPMFQVNEPGRTAW
VKLDYTF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaaacataaaacaataacactggcctcagtgatcaccgctaccatgagtattccaact
ctggttttccctctgacagcccttgccgaagatgagccaagggactgtggagaccgtcga
tgtgacgactatattgtcatcacgggtgacttgatgcgcgagccgacaaaggtcgtcaca
gatcccaagaagccaaggctgccactcccctcatatgatggtgcaggatttctgaaaacc
attcccggattcagtatcggtcgaaaagggggggccggtggcgatccatccttaagaggc
atgggcggctcacgcatcagcatcgtcgatgatggccagcatgtgtatggcacctgcggt
ggacgcatggatccaccgacggcctatatctacccggaggcttatgacagcatcactgtg
atcaaggggccacaaaccgtaaaatatggtccggtgggctccgccggaactgttttgttt
gaaaaagacagacatagctttgtcgaacccggcgtcgaagggcgggccagcgtcacaggc
ggcagtttcgagcgacaagactatatcgtcgaactgaaagccggtgatgagacccactat
ctcgatctggatgtcaatcaatccagcagcgatcactaccaggatggtgacggaaacacg
gtgcaatccagctacgaccgtaacaattacaatatcgccctggggtggaccccgacagac
accagtgttatcgaactcgcttatggtaagtctgatggtgaagccgagtacgccgacagg
gccaataaggcccgggtgatcaataatgaaaatgtcaccctgttgactcagttcgagttc
gactcggatcttatccgcgaaattgagtttcaggcctacaccaacaagaacgaccatatc
atggaccagttcgatcagggggtgaactccggagtcaatgttcgccgcaaaacctcgggg
ggtcacttctggctggagctaacaccgagtgagagtttggaggcaaccttaggggtcgat
tacatgcagagtacccatgagggacgcggtataaaccctgagtttgataacggtctcgat
gacctgctatctaaaccatttaaagataatatgcgttatgaaaacatgggaatatttatc
gaagccgactatgccttaggaggaggaaatctactctcagggttacgcttcgaccattgg
gacagtgaactctttgtcgcgcagacgggtaaacgcagtgacgacctgatcagcgggttt
attcgttatgaatatctcaatggtaataaccagtattaccttggtacgggtcatgcgcag
cggatccccgattattgggagatcatgaaggccagtccggataacctatccaccaaggca
ttcgatctcgagcccgagaagacaacccagctggacattggttggatataccaagccaat
atcgaaatatcgacctcactctattatggcaaggtcgatgattacatcttagttgactcc
aatacatcgaaaacctccgcctacaacatcgatgcgaccatatggggcggcgaggttggc
ataacctacccgtttacggagcagtggtcagcgcaaacgaccctcagctatagccatgga
gaaaatgacactcaggatacgcctctgggacaagtctctcctatggagggacgtgtatct
gtcaattatgagggagaagagtggacggcggggctgttctggcgtgttgttgcggctcag
gatcgagtctctatcggtcaaggtaatatctcaggtcaagatctggctgagagcagtggc
ttcggcacactcgccatcaatggatcatggaagcatggcgacgtggttttagtgagtttc
ggtatcgaaaacctgtttgatatcacctatgccgaacatgtgagtcgctctggtgccggt
aacgatatccccggtagtgagcctatgtttcaggtcaatgaacccggccgcaccgcatgg
gtgaagctggactataccttttag
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