Shewanella sediminis: Ssed_4483
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Entry
Ssed_4483 CDS
T00596
Name
(GenBank) TonB-dependent siderophore receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sse
Shewanella sediminis
Brite
KEGG Orthology (KO) [BR:
sse00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sse02000
]
Ssed_4483
Transporters [BR:
sse02000
]
Other transporters
Pores ion channels [TC:
1
]
Ssed_4483
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
ABV39085
UniProt:
A8G1W2
LinkDB
All DBs
Position
complement(5485952..5488090)
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AA seq
712 aa
AA seq
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MSFKRSFKYSSISVAVLSALATIPAIAEELTGEPGIANIERISVTGRNFNDYKVGSASGA
MRGDISLMDTPQSVTVIPDFVTDEQLATNLSEVLVNDSSVTGGSEKWNRQVFSIRGFELS
SGSGYLINGQQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYDTMFE
LGFDTDEHGSTRYQLDAGGSLNEDQTIRYRTVLVKQDTQYWREYQDGSNQERDRWLGYLN
LEFDITDDLLLSLKYDHTQDKTGIDRGGWLDSSGELIGGNDIIWDQPWAFTDNTISNMGV
DLTYHINDDWKVKAGYNDQQFNRQRLDSSPSMISSSDDPMTNGYYVSPFDRYDDWQHKTS
YVDFVGNFSTGGLEHQFLLGANMLDYYYGQLKDSGEKKQLVMPGQPLPKPDLDYNRDETL
YESEYKHYGFYIQDLISINDQWQVLAGVRYDEQKKEGAGNNSYAVSPKFGVIYSPAANGS
IYVNYSKSFTPQGIVNDEDDVNNKMNLDPEYGEQYEIGTKWELFDGSLLLTGAVFDITVS
NVTVTEDLTTPIGDDTKITTQGGEQRHKGFEMGAQGQVSEKWFMTGSMMYLDAQYETGAN
DRDNLDGMTPVDAPEWSANVWTRYEMTDDLALNFGAIYVGERFANTDNTISKDSYVRFDM
GAAYSMDVMGSDVSVRLNIKNLFDVDYLAGGTTTDVTVGEGRHFGLALEAKF
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcaagagatcatttaagtattcatctatcagtgtcgcggttctgtctgcactt
gcaaccattcccgctattgccgaggagctaactggtgagccgggtatcgctaatattgag
cgcattagtgtcactggtcgtaacttcaatgattacaaggttggcagcgcttcgggtgcg
atgcgtggtgatatcagccttatggataccccacaatctgtgactgtcattcctgatttt
gtgaccgatgagcagctggcaacgaacctttctgaagtcttagtgaatgattccagtgtt
accggtggcagtgagaagtggaaccggcaggtgtttagcattcgtggtttcgagctctct
tctggttccggttatctgattaatggccagcagcagtggtctcactatgtgcagccgatt
gaaacactgcaacaggtggaagtactcaagggtccatcgagcatgttgtatggtcaatct
ggccccggtggtttgatcaacatggtcaccaagaaaccgacttatgacactatgtttgaa
ctcggcttcgataccgatgaacatggctctactcgttatcagcttgatgccggtggcagc
ctgaatgaagatcaaacgatccgctaccgtaccgtgttggttaaacaggacacacaatac
tggagagaataccaggacgggtccaaccaggagcgtgatcgctggttaggttatctgaat
cttgaatttgatatcaccgacgacctgttactgtcgcttaagtatgaccatacccaagac
aaaaccggtatcgaccgtggcggttggttagacagcagtggagagcttatcggtggcaac
gacattatctgggatcagccttgggcgtttaccgacaataccatcagtaacatgggcgtc
gatctgacttatcacatcaatgatgattggaaggtgaaagcgggctataacgatcagcag
tttaatcgtcagcgtctagactcttcaccatcgatgatcagcagctcagatgacccaatg
acaaatggttactatgtgagtcctttcgaccgttatgatgattggcagcataagaccagt
tatgtcgacttcgtcggtaacttctcgaccggtggcttagagcatcagttcctgctcggc
gctaacatgctggattactactatggtcagttaaaggactcaggtgagaagaagcaactc
gttatgcctggtcagccgttgcctaagcctgatctcgattacaaccgtgatgagacacta
tatgagagtgagtataagcactacggcttctatattcaggatttaatctctatcaatgac
cagtggcaggtacttgccggcgtgcgttatgacgagcagaagaaagagggcgcgggtaat
aatagctacgccgtctcgccgaagtttggtgttatctactcaccagccgctaacggtagc
atctacgtcaactactctaagagcttcacgcctcagggcatagtcaacgatgaagatgat
gtaaataacaagatgaaccttgaccctgaatatggtgagcaatatgagattggtactaag
tgggaactcttcgatggcagcctactgctaaccggtgccgtattcgatattacagtttca
aacgtcacagttactgaagatctaaccacgcctatcggtgatgacactaaaatcaccacc
caaggtggagagcagcgtcataaaggtttcgagatgggcgctcagggccaggtgagtgag
aagtggtttatgactggctcaatgatgtatcttgacgctcagtatgaaaccggtgctaac
gacagagataatttagacggcatgacacctgtcgatgctccagagtggtcggctaacgtg
tggacccgttacgagatgaccgacgacttagcgctgaacttcggtgccatctatgtgggt
gagcgattcgctaataccgataacactatctcgaaagatagctacgtgcgtttcgatatg
ggcgcagcctatagcatggatgtgatgggcagcgatgtgagtgttcgcctgaacattaag
aacctgttcgatgtcgattacctggccggtggtacaactaccgatgttacagtaggtgaa
ggacgtcacttcggcttagcattggaagctaagttttaa
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