Sphingomonas sediminicola: H9L14_03290
Help
Entry
H9L14_03290 CDS
T07077
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ssed
Sphingomonas sediminicola
Pathway
ssed02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssed00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H9L14_03290
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssed02000
]
H9L14_03290
Transporters [BR:
ssed02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
H9L14_03290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QNP46261
LinkDB
All DBs
Position
complement(589948..591432)
Genome browser
AA seq
494 aa
AA seq
DB search
MRLPLFRRACAAASLILAAISVAGCQRADRGETKVVVIGDPPTIVDPSNGPLTEPQSVLL
ANVAQGLVRFDASGQIVPGLAERWNVTDDGLSYIFRLQTAEWPDGRRITAQQVARLLRRQ
VTARSKNSLKDTLGAIEEIVPMTDRVIEISLKAPRPHLLQLLAQPEFAIVRETVGTGPFQ
IAEDSKPNALNLVRTTSNEDEETTAREEVTLSGRPAAAAVQAFLKGDTDLVVGGTFGDLP
YTRADEMPKNALRFDPAAGLFGLVPARASGPAADPEIRRLLSQAIDRQAIIDALNVPGLL
PRATLLEPGLDGLADPAVPQWMATPIDQRRADLASRAAKMFGRLDKPVIRIELPNSPGAK
ILLSRLASDWGALGITVEAAAPGRAADFRLLDAVAPSISPAWYLRSFRCGEVPVCDPEAD
KLLEGARVATVAAQRNALLAQAGQRMDEEQLFISLTAPIRWSLVSDRVQGFATNRFALHT
LTSLGERLGRERGE
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgccgttattccgccgcgcctgtgctgcggcatcgctgatcctcgcggccatt
tcggtcgccggctgccagagggcggaccgcggagagacgaaggtcgtcgtcatcggcgat
cctccgacaatcgtcgacccgtcaaacggtccgttgaccgagccgcagtcggtgcttctt
gcaaacgtcgcgcaaggtctcgttcgctttgatgcctccggtcagatcgtccctggcctc
gcagagcgctggaacgtcaccgacgatgggctgagctacattttccggctgcagacggcg
gaatggccggacgggcgcaggatcactgcgcagcaagttgcgcggctgcttcgccgccag
gtcacggcccggagcaaaaattcactcaaagatactttgggcgcgatcgaggagatcgtc
ccgatgaccgaccgggtcatcgagatcagcctaaaggcgccgcgcccgcatctgctccag
ctcctcgcgcaacccgaattcgcaatcgtccgcgaaacggtcgggaccggaccgttccag
atcgccgaggacagcaagcccaatgcgctcaacctggtgagaactacctccaacgaggat
gaggaaacgaccgcgcgggaagaagtgaccctgtccggcaggccggccgccgcggccgtc
caggctttcctgaaaggcgacaccgacctggtggttggcggcacgttcggggacctgccc
tacacgcgcgcggacgaaatgccgaagaacgcgcttcggttcgaccccgcggccggcctg
ttcgggctggtcccggcgcgggcgagcggccccgccgccgatccggagatccgtcggctg
ttgagccaggcgatcgaccgccaggcgatcatcgacgcactgaacgtgcccggcctgctg
ccaagggcaacgctgctcgagcccggcctcgatgggcttgcggacccagccgtgccgcaa
tggatggctacgccgatcgaccagcgacgcgcggatctcgcctcaagagcggcaaagatg
ttcgggcggctcgacaagcctgtcatccggatcgaactgcccaattctcccggagcaaaa
attctgctgagccggctggcaagcgactggggtgcgctcggaatcacggttgaggccgcg
gctcccggacgggcagcggacttcaggctgctcgacgccgtggctccgtcgatctcgccg
gcctggtatcttcgctcgttccgctgtggcgaagttcccgtttgcgatccggaagccgac
aaattgctggagggcgcacgggtcgcgacggtcgccgcacagcgcaacgcccttctcgcg
caggccggccagcggatggacgaggagcagttgtttatctcgctgacggctccgattcgc
tggtcgctcgtttccgatcgcgtgcaaggcttcgcaaccaaccgtttcgcgcttcatacg
ctgacgtcgcttggcgagcgactgggccgggagcgcggagaatga
DBGET
integrated database retrieval system
