Shewanella seohaensis: N7V09_14415
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Entry
N7V09_14415 CDS
T08778
Symbol
rsmF
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
sseh
Shewanella seohaensis
Brite
KEGG Orthology (KO) [BR:
sseh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sseh03009
]
N7V09_14415 (rsmF)
Enzymes [BR:
sseh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
N7V09_14415 (rsmF)
Ribosome biogenesis [BR:
sseh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
N7V09_14415 (rsmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
YebU_pre-PUA_dom
Methyltranf_PUA
RsmF-B_ferredox
Methyltransf_31
NSUN5_fdxn-like
Methyltransf_25
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UXM83934
LinkDB
All DBs
Position
3215608..3217056
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AA seq
482 aa
AA seq
DB search
MVQLNQNFINTIAQELPAHLSMDDFIAACSRPLRRSIRVNTLKISSEDFKQLMQPKGWTF
EPIPWCEDGFWISYDEEEQLGNALEHIQGLFYIQEASSMLPPTALFTPNANWQCVLDLAS
APGSKTTQMAALMNNQGLLVANEYSASRVKVLHANVLRMGACHCALTHFDGRVFGEYLYE
SFDAVLIDAPCGGEGTVRKDADALKSWSLDEVIEISETQKALIESAFLALKPGGSLVYST
CTLNRHENQGVCEYLQQTYGDAVQFESLSQLFDGAEKATTPEGFLHVWPQIYDSEGFFVA
KLTKTRSVPRLQPEPKLQKNFPFTEASAKQAKAIQAYFADDLGIELPDDLIMVRDDEFWL
FPHEFKDFIGKMRFQRIGVKLADHSKHGFKVRHEAIIALAGKALTSGATNGAKVVDVSDE
QAKEYLMGRDIPLDTTGKAQGEVIVCYGGAPLGMAKHLGNKLKNSLPRDLVKDKVLLLPP
QA
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggttcaattaaatcaaaattttatcaatactattgcccaagaactgcctgcccatctc
tcaatggatgactttatcgcagcctgttcgagaccactacgccgctcgattcgcgtcaac
accttaaagatcagcagtgaagactttaagcaattaatgcagcctaagggatggaccttt
gaacccattccctggtgtgaggatggtttctggataagctacgatgaagaagagcagctc
ggcaacgccctagagcatattcagggattgttctatatccaagaagccagctccatgttg
ccccccactgcgctatttaccccgaatgcgaattggcaatgtgtattagatttagcttcg
gcgcccggctctaaaaccacgcaaatggcagcgttaatgaataatcaaggcttattagtc
gccaatgaatattccgctagccgcgtcaaagtgctccatgccaatgtgctgcgcatgggg
gcctgtcactgcgccctgactcacttcgatggacgggtatttggcgagtatctgtatgaa
agttttgatgcggtattgattgatgccccctgcggcggtgaaggcacagtccgtaaagat
gcggacgcgttaaaatcttggtccctcgatgaggtgatcgaaattagcgaaacccaaaaa
gcgttaatcgaatctgcatttttggcgttaaaaccgggtggcagtttggtgtattccact
tgcacccttaatcggcacgaaaaccaaggcgtgtgcgaatatttacagcaaacctatggc
gatgcggtgcaatttgaatccttaagccaactgtttgatggcgccgaaaaagccactacg
ccagaaggctttttgcacgtttggccgcaaatttacgacagtgaaggcttttttgtcgcg
aagttgactaaaacccgctcggtgccgcgcctgcaacctgagcctaaattgcaaaagaat
ttcccctttacggaggcaagtgccaaacaagccaaagccattcaagcctattttgccgat
gatttgggtatcgaactgcccgatgatctcattatggtgcgcgacgatgagttttggctc
tttccccatgagtttaaagattttattggcaaaatgcgctttcagcggattggggttaag
ctggccgaccacagtaaacatggctttaaagtccgtcatgaagccattattgcgcttgcg
ggaaaagcacttacctcgggggcgacaaacggcgctaaagtcgtcgacgttagcgatgag
caagcgaaagagtatttgatgggacgagatattcccctcgatacgacaggtaaggctcaa
ggtgaagtgattgtctgttatggcggcgcgcccttaggcatggctaaacatttaggcaat
aaattaaaaaacagcctgcccagagacttagtaaaagataaagtgttattgctaccaccg
caggcataa
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