Shewanella sedimentimangrovi: JYB85_02105
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Entry
JYB85_02105 CDS
T07846
Name
(GenBank) PKD domain-containing protein
Organism
ssem
Shewanella sedimentimangrovi
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
fn3
Reprolysin_3
Reprolysin_5
PPC
Motif
Other DBs
NCBI-ProteinID:
QSX37654
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All DBs
Position
complement(502743..505676)
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AA seq
977 aa
AA seq
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MKYSTLPLTTLPLTTLVLLGLSLWPLTANSANPPPNQRIFPQLSLPTKAQGEQAIAALGA
KLPEVAAWYGMSPDEFARELRSDATLWLDTKGRAFYVDQFPQATDPADAQLLQEAPYPLE
DTFHLHSRPGANRVIYLDFDGHITTGTAWNNSYGVDPIVSPPYSRDSDSSTFSTSELQDI
QNMWRQVAEDYAPFNVDITTEDPGLNAITRSSTSDQVYGTRVVMTKDNFAGCGCGGFAYL
TVFDDVGDFYKPAFVFNTSLVGAGEAISHEAGHNLSLSHDGVIGGANYYTGHGSGATGWA
PIMGVGYYQALVQWSKGEYLNANQTQDDIARIQTYGAPLVADDHGDSLATATTLNASASN
GVLSLGGSGLIHSRQDVDLYRFHAGAGSYSIDVQPAPFAPNLDILAQLYDANGNLLANSN
PVDALSANLSGTLASAGDYFVKVDGTGKGDPLDTGYTDYASLGRYSISGTAVDGGTAAVP
TAAMALSYTPGPAPLSVNFDGSGSDDSDGTIMSYDWNFGDGTNASGAEVSHVYQAPGDFT
VVLMVTDNDNLSDQASQVVNVQNQPPVAVGSADTLSGTAPLTVNFDGSGSHDQDSAGTIS
NYQWNFGDGSGASGVNASHSYSQAGSFTPTLTVTDNLGAMGMTTLPAIEVAPAPFLLQYA
GSETTAAGTVSGSLANLQTDDGVLEIITERESGGRKSSRYSYLDHSWNFNVQSGNAETLV
LHGWQSVSSDGDQLLLYLTSSTATNVLLTQMPSSDQGPQSIPLPANLSGQVQISVRDSDQ
SVGHLSLDSLYLDLLYIRTDNQSGGAVPASPTALSATSVSASQIDLSWSDNAGDEQGYSI
ERSLDGVNWASIFTTGVDGSGHSDTGLAANTQYWYRVRAFNQSGNSGYSNEATATTDLGS
GLSLTASGYKVKGVQQVDLSWSGNSGDVDIYRNNALVATVSGSDYTDNLNLKGAGSYDYQ
ICNAGSSDCSDIVTVIF
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgaagtattcgactctgcctttgacgacactgcctttgacgacattggtgctccttggg
ctcagcctctggccactgacggcaaacagtgccaatcccccgccgaatcagcgcatcttc
ccacagctgtcactgcccacaaaagcccagggcgaacaggccatagcggccttgggcgcc
aaactgcccgaggtggcggcctggtacggtatgagcccggatgagtttgcccgcgagctg
cgcagcgatgccactctgtggctcgataccaagggccgcgccttctacgtggatcagttc
ccccaggcgaccgacccggccgatgcccaattgttgcaggaagccccctatccgttggaa
gacaccttccatcttcacagccgcccaggcgccaatcgggtaatttacctggactttgat
ggtcatatcaccacgggcacggcctggaacaactcctatggtgtcgatcccatagtctcg
ccgccctacagccgtgactcggactccagcaccttcagtacatcagagttgcaggacata
caaaacatgtggcgccaggtggccgaagactatgcccccttcaacgtggatatcaccacc
gaagatcccggcctcaacgccatcacccgcagcagcacgtcggatcaggtctacggaacc
cgggtggtgatgaccaaggacaacttcgccggttgcggctgcggcggctttgcctatctg
acggtatttgatgatgtgggcgacttttacaagccggcctttgtgttcaacaccagttta
gtgggtgccggggaagccatctcccacgaggcggggcataacctcagtctgagccacgat
ggtgttattggtggtgccaattactataccggccacggcagtggcgccaccggctgggcc
cccatcatgggggtgggttattaccaggccctggtgcagtggagcaagggcgaatacctc
aacgccaaccaaacccaggatgatatagcccgcatccaaacctacggtgcgccgctggtg
gccgacgatcacggcgacagcctggcgaccgccaccacgttgaatgccagcgcaagcaac
ggcgtcctcagccttggtggcagtggtcttatccacagccgccaggatgtggacctgtac
cgctttcatgccggcgccggcagttacagtatcgatgtgcagcccgccccctttgccccc
aatctggatattctggcccagctctatgatgccaatggcaatttgctggccaacagcaat
ccggtcgatgccttatccgcaaacctgagtggcactctggccagtgccggggactatttc
gtcaaggtggatggcacaggtaagggcgacccgctcgacacaggctacacagactatgcc
agtctggggcgttacagcatcagcggaactgcggtcgatggcggcactgccgccgtcccc
acagcggccatggccctgagttacaccccgggccccgcccctttaagcgtaaactttgac
ggctcgggctcggacgacagtgatggcactatcatgagctatgactggaacttcggcgat
ggcaccaatgccagtggcgctgaggtcagtcatgtctatcaggcacccggtgattttact
gtggtactgatggtcacggataatgacaacctcagtgaccaggccagccaggtggtgaac
gtgcaaaaccagccgccggtcgccgtgggttctgccgacacgctttccggcacagcgccg
ctcacagtcaacttcgacggctcgggctcccatgaccaggacagcgccggcactatcagc
aactatcagtggaactttggtgatggcagcggtgcttccggcgtcaatgccagtcacagc
tatagccaggccggcagtttcacccccacactgacggtcacggataatctgggtgcgatg
ggcatgaccacactgccggccatagaggtggcccccgcccccttcctgctgcaatatgcc
ggcagcgaaaccacggctgcgggcactgtgagcggcagtctggccaacttgcagaccgat
gacggtgtgctggaaatcattaccgagagagagtccggcggcaggaagagcagcagatac
agctatctggatcacagctggaacttcaacgtccaaagcggcaatgccgagaccctggtg
ctccacggctggcagtcggtgtccagcgatggtgatcagctgctgctgtatttaaccagc
agcacggctaccaatgtgctgctgacccagatgcccagcagcgatcagggtccgcaatcc
atcccgttgccggcaaacctcagcggccaggtgcaaatcagtgtccgtgacagcgaccag
agcgtcggtcacctgtcactcgacagcctgtatctggacctgctctatattcgcaccgac
aaccagagcggcggtgctgtgcctgcgtcgccgacagctttatcagccacttcggtctcc
gccagccagatagatttgtcctggagcgacaatgcaggcgatgagcagggctatagcata
gaacgctctttggatggagtgaactgggcgagtatcttcaccactggcgtggatggcagc
ggccacagcgacacagggctggcagctaatacccaatattggtatcgcgttcgcgccttt
aaccagagtggcaattccggctattccaacgaagccactgcaaccacggatctgggctca
ggcttaagcctgaccgccagcggttacaaggtgaagggcgtgcagcaggtggacctgtcc
tggagcggcaacagcggtgatgtggacatatatcgcaataatgccttggtagcgacggtt
tccggcagcgattacacagacaacctcaacctcaagggcgccggcagctacgactatcag
atctgcaacgccggcagcagcgattgctcggacatagtgacagttatcttctaa
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