Shewanella sedimentimangrovi: JYB85_04485
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Entry
JYB85_04485 CDS
T07846
Name
(GenBank) carbohydate-binding domain-containing protein
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00511
Other glycan degradation
ssem00520
Amino sugar and nucleotide sugar metabolism
ssem00600
Sphingolipid metabolism
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
JYB85_04485
09103 Lipid metabolism
00600 Sphingolipid metabolism
JYB85_04485
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
JYB85_04485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ssem03110
]
JYB85_04485
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
JYB85_04485
Chaperones and folding catalysts [BR:
ssem03110
]
Intramolecular chaperones
Others
JYB85_04485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
CHB_HEX
CHB_HEX_C
Glyco_hydro_20b
Motif
Other DBs
NCBI-ProteinID:
QSX38990
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All DBs
Position
1063950..1066610
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AA seq
886 aa
AA seq
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MMKTSAAILLLLSMIGVSACSPQEPQQVSLPELPAPQASPAALTQSELQRFADNLKISYR
VLTNVSDDQCARDRAGGRCFQAEISLTSSFEFSAADWRIYFSQMRPVQSLNSSEFIISHI
QGDLHSISPSAGFSGFKAGETKVLLIRADFWQLSEVDAMPNYYLVAPNLQPVVIASTQLQ
QDPETGLEVRPYMVAFTDEERQFKRSPEDNLPWAKANVIYERNQDTPDNAELAADSLLPT
PLHQELLPEQAPVDLKKGISPVFIGTQRAPVAAALARLARLGVREDAAGVALELVSDPSL
ASEGYRLDIAAGAIKISAAGAAGFSYGLSSLASLLDPDSLQVSAMRIRDEPHYGFRGLHL
DLARNFHSKQLLLKLIDAMAAYKLNRLHLHLADDEGWRLEIDGLPELTDIGSKRCHDLAE
DSCLLPQLGSGPDPDSAVNGFLSMADYVELLQFAAVRQIQVIPSMDMPGHSRAAIKAMEA
RYRRLLAKGDSKGATEYRLLDPEDKTQYSSVQYYNDNTLNVCLESTFHFVDKVIDEVTKL
HQSAGVPLQLYHIGADETAGAWLESPACEALLAADSSIGDKQHLGAYFIERVSTMLASKG
ITPAGWSDGLGHVRADRMPAKVQSNSWDLLSHQGHRVAHRQANLGWQLVLSTPEVLYFDF
PYEADPKEHGYYWGARQNNSRHLFNFMTDNLPANAEQWTDIENRPYSADDRSTAGEQVSE
PLRPENRMAGIQGQIWSETLRSDELVEYMAFPRLLMLAERAWHKPDWQVPYQYQGAIYNA
DSGFFSAELKLAQAQDWYRIANLLGHKELKKLDLAGIGYRIPTVGARISEGRLYTNLIFP
GLGIEYRLGECAWQTYQGSIEVGAGPVQVRAVGADGKRRGRSLQVQ
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
ataatgaagacttctgctgcaattctgctgttgctgagcatgattggcgtgagtgcttgc
tcaccccaagagccacagcaggtttccctgcctgagttacccgccccgcaggcgtcgccg
gcagcgttaacccaatctgagctgcagcgttttgccgacaatctcaagattagctaccgg
gtgctgaccaatgtctccgatgaccaatgtgcccgtgacagggccggagggcgttgtttt
caggcggaaatcagcctgacctcttcttttgaattcagtgccgctgactggcgaatctat
ttcagtcagatgcggccggtacaatccctgaattcctccgagtttatcattagccatatc
cagggcgatctgcacagtatcagcccttcggccggcttcagcggtttcaaggccggcgag
accaaggttctgctaatccgcgccgacttttggcaactttccgaagtcgatgccatgccc
aactattatctggtggcgcccaatctccagcctgtggtaatcgctagcacccaattgcag
caggaccccgaaaccggcctggaagtgcgtccctacatggtggcgttcaccgatgaggag
cgccagttcaagcgcagccccgaggataacttgccctgggccaaggccaatgtcatttat
gaacgcaatcaggataccccggataacgccgagctcgccgctgacagcctgttgccgaca
ccgttgcaccaggaattgctgccagagcaagcgccggttgatctgaagaaggggatttcc
ccggtattcatcggcacgcaaagagctcccgtggcggccgccctggcaaggttggcaaga
ctgggtgtgagagaagatgccgccggtgtcgctttggagctggtcagtgacccctcacta
gccagcgagggctaccgactcgatatcgccgcaggggccatcaagatcagtgctgccgga
gccgccggtttttcctacggcctgtcgtcgctggcttccttgttggatcccgattccctc
caagtcagcgccatgcgtatccgggacgagccccactatggtttccgtgggttgcatctg
gacctggcgcgcaattttcactccaaacagctgctgctgaaacttatcgatgccatggcg
gcctacaaactcaatcgtctgcacctgcatcttgccgatgatgaaggctggcgcctggag
atagatggcttgcccgagttgaccgatatcggcagcaaacgttgccacgatctggctgaa
gacagctgccttttgccacagctgggcagtggcccggatcccgactcggcggtcaacggt
ttcctcagcatggccgactatgtggaactgctgcaattcgcggccgtcaggcaaattcag
gtgattccctccatggatatgccggggcacagccgggccgccatcaaggccatggaggct
cgataccgccgtttgctggccaagggcgacagcaaaggggcaaccgaatatcgcctgctg
gatcccgaggataagacccaatacagctcggtccagtattacaatgacaacacgctcaat
gtctgtctcgaatccacttttcactttgttgacaaggtcatagatgaagttaccaagctg
caccagagcgccggtgtgcccttgcagctgtatcacatcggcgccgatgagaccgccggt
gcctggctggaatctccggcctgtgaggcattgcttgctgccgacagcagcattggtgat
aaacagcatctgggggcttactttattgagcgggtcagcaccatgctggcctccaagggc
ataacgcctgcgggctggagcgatggcttggggcatgtccgtgcggatcgcatgccggcc
aaggtgcaaagtaacagctgggatctgttgagccatcaggggcacagggtggcgcacagg
caggccaatcttggctggcaactggtactgtccacacccgaggtcctgtattttgatttt
ccctatgaggccgatcccaaggaacatggctattactggggagcaaggcagaacaacagt
cgccacctgttcaactttatgacggacaacctgccggccaatgccgagcaatggaccgac
attgagaatcgcccctatagcgccgatgaccgctccactgcgggcgagcaagtgagtgag
cccttacggccggaaaaccgtatggcagggatccagggacaaatatggagcgaaaccctg
agatctgacgagctggtggaatacatggcctttccgcgtctgttgatgctggccgagcgc
gcctggcataagccggattggcaagtgccttaccagtaccagggcgccatctataacgcc
gacagcggattcttcagtgctgaactcaaattggcccaggcacaggattggtaccggatt
gcaaacctgttggggcataaggaactcaaaaaactggatttggccggcattggctaccgg
atcccgacggtgggcgcgcgcatatccgagggacgtctgtataccaacctgatatttccc
gggctggggatagagtaccgcctgggagagtgcgcctggcaaacttaccaaggcagcatt
gaagtcggtgccgggcccgtacaggtacgcgccgtgggggccgacggcaagcgccgtggt
cgcagcctgcaagtgcaataa
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