Shewanella sedimentimangrovi: JYB85_11910
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Entry
JYB85_11910 CDS
T07846
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00521
Streptomycin biosynthesis
ssem00523
Polyketide sugar unit biosynthesis
ssem00541
O-Antigen nucleotide sugar biosynthesis
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01250
Biosynthesis of nucleotide sugars
Module
ssem_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JYB85_11910 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JYB85_11910 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JYB85_11910 (rfbC)
Enzymes [BR:
ssem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JYB85_11910 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
QSX36042
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All DBs
Position
complement(2737413..2737970)
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AA seq
185 aa
AA seq
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MKVIKTKIKDLVVIEPKIFGDERGFFYEMFQSERYKNAGINENFVQDNRSRSAKGVLRGL
HFQKNKPQGKLVSVTIGEVFDVAVDLRKDSETFGQFESVLLTGENKLQFYVPPGFAHGFC
VLSESADFQYKCTDYYDPSDESGLIWNDPDLNIPWPISSPLLSEKDMTLPTLAEIKYKII
NGWEQ
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattaaaactaaaatcaaagatcttgttgtaatcgaaccaaaaatatttggt
gatgaacggggttttttctatgaaatgtttcaatctgaacgttataagaacgcgggcata
aacgagaattttgttcaagataaccgctctcgttcagctaaaggagttcttagaggctta
cacttccaaaaaaataagcctcaaggaaaattagtatcagtaacaattggtgaggtgttt
gatgtcgcggttgatttgcggaaagactcagagacttttggtcaatttgagtctgttctg
ttaaccggtgagaataagttacagttttatgtgcctcccgggtttgcgcacggtttttgt
gtgcttagtgaatcggcagactttcaatataagtgtacggattattacgacccatcagat
gaaagtggcttaatttggaacgatcctgatttaaatattccatggcctataagctcgcct
ttattatctgaaaaagatatgactctaccgacactcgctgaaattaagtataagattatc
aatggatgggagcaataa
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