Solea senegalensis (Senegalese sole): 122758176
Help
Entry
122758176 CDS
T07721
Symbol
trim32
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122758176 (trim32)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122758176 (trim32)
Enzymes [BR:
ssen01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122758176 (trim32)
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122758176 (trim32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-C3HC4_4
zf-RING_4
zf-RING_11
Baculo_IE-1
Prok-RING_4
Sina_RING
Haem_bd
OmpH
Motif
Other DBs
NCBI-GeneID:
122758176
NCBI-ProteinID:
XP_043868082
LinkDB
All DBs
Position
LG21:complement(9401284..9406869)
Genome browser
AA seq
686 aa
AA seq
DB search
MMASPCFPLDPDLMREVLECPICLETYNQEQMRPKLLQCGHTVCRQCLEKLLANTINGVR
CPFCSKVSRMSSISQLADNLTVLKILDCTISCSAAAAALMCKACCNRLPRQYCHDCGTVL
CEFCKGEGHLQEGHTVQPIRVAAEQRRKELGGKMSALRNIMGEIQKKKTSVESISKALRL
KYRAVQQDYTTAELCYQEELSRARRTFTASMSEVEKLNGQVLEEQTYLLNIAEVKVVSRY
DYLTMRVRQSDIALLKDDGGGSDDEDLDLRSSLPTTFQLQEPELVQAEHSKPLQVGHLAT
NTYTVNTDDEESGLEIGLEGDVEGVAGAAGATSGAMEAPVDIYRDIDMTAVVEEAIYGSP
GSFKSKSLDAAGGSPRGTGASAGPPVCQYLKKMGCKGTLPGMFNLPVSICVTSQGEVLVA
DRGNYRVQIFNRKGFHREIRRNASSIDNFVLSFLGADLPNLIPLSIAVTNQGLIGVTDNY
DNSVKVYTMDGHCVACHKNQLIKPWGITAMPSGQFVVSDVEGGKLWCLAVDRSAGVVSYS
RLCSAVRPKFVTCDAAGTVYFTQGLALNFEKRHNEPHLEGGFSIGSVGTDGQLGKQLSHF
FSEAEDFRCITGMCVDANGDLLVTDSGRREILQFPKEGGFKILIQDGLTCPVGVATTQKG
QLLVLDCWDHCIKVFSYIQRRHSSIS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatggcatcaccatgttttccactggacccagatctaatgagggaggtacttgaatgt
ccaatctgcctcgagacctacaatcaggaacaaatgagaccgaaactcctgcagtgtggt
cacacagtgtgccgacaatgtctggagaagctgttggctaatacaatcaacggtgttcgc
tgccccttctgtagcaaagtctcccgcatgagcagtatctctcagctggctgataatctc
actgtgctgaaaatccttgattgtactatatcctgcagtgctgctgctgctgccctcatg
tgcaaggcctgctgcaatcgtctgccacgacagtactgccatgactgtggcacagtcctc
tgtgagttctgtaaaggggagggccacctccaagaaggccatacagttcaaccgataagg
gtggctgctgaacagcgtcgtaaagaactgggtggcaagatgtctgcattgcgcaacata
atgggtgaaattcagaagaagaagacatctgttgaaagcatctccaaggctttgagatta
aaataccgtgcagtgcagcaggactacactactgctgaactatgttatcaagaggagctc
agtagggctcgaaggacattcactgcttccatgtcagaagtagagaaactcaatgggcag
gtcctggaggagcaaacatatcttcttaacattgcagaggtaaaggtggtatcacgctat
gattatctcacaatgagggtgaggcagagtgatattgccttacttaaggacgatggtgga
ggcagcgacgatgaggatctggatctgaggagcagcttgcccaccacgtttcagttgcaa
gagccagaactagtccaagcagagcactccaagcccttacaagtgggccacttggccaca
aatacttatactgtcaatacagacgatgaggagagtgggttagagattggacttgagggt
gatgtagagggtgtagctggggcagcaggggccaccagtggagcaatggaggctccagtg
gatatttaccgagatattgacatgactgcagttgtagaggaggccatatatggttcacca
ggcagcttcaagtcaaagtccttggatgcagctgggggatcaccaagaggaaccggggca
agtgcagggcccccagtctgccagtatttgaagaagatgggctgtaagggaactctacct
ggtatgtttaatttacctgtcagcatctgtgtaacatcacaaggtgaggtgctagtggcc
gaccgtggaaactaccgtgtccagatctttaatcgcaaaggcttccatcgtgaaattcgc
cgcaatgccagtagcattgacaactttgtcctgagcttccttggggctgacttgcctaat
cttatccccctgtccattgctgtcactaatcaaggtctgattggggtcactgataactat
gataactctgttaaagtctacacaatggatggacactgtgtggcttgtcacaagaaccaa
ctgattaaaccctggggtattactgccatgccatcaggccagtttgtggtgtcagatgtg
gaaggtggtaagttatggtgtttagcagtggaccgcagtgcgggcgtggtgagctacagc
agactgtgctctgctgtccggccaaagtttgtgacatgcgatgcagctggaactgtttac
ttcacccaggggctggcactgaactttgaaaaacgtcacaatgagccccacctggagggt
ggcttctccattggttcagtgggtactgatggccagctgggcaagcagctcagccatttc
ttctcagaggcagaggacttccgctgtatcactggcatgtgtgtggatgccaatggagat
ttgctggtaacagacagtggcaggagagaaattctccaatttcccaaagagggtggattc
aaaattctcatccaggatgggctgacctgccctgtgggagtggccaccacccagaaagga
cagctgttggtgctggattgttgggaccactgtatcaaagtgttctcttacattcagagg
aggcattcttccatttcttag
DBGET
integrated database retrieval system
