Solea senegalensis (Senegalese sole): 122758320
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Entry
122758320 CDS
T07721
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122758320
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122758320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_10
U-box
CoV_S2
Motif
Other DBs
NCBI-GeneID:
122758320
NCBI-ProteinID:
XP_043868349
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Position
LG21:1010131..1012257
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AA seq
580 aa
AA seq
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MAGVQLQRENISCSICLDLLKKPVTLNCGHSFCKNCIKDHWDSEEEKRMYSCPQCRKIFI
PRPELKKNTMLADLVEELKKTGLHAAPAHHCYAGAEDVACDVCTGRKLKALKSCLVCLAS
YCEEHLQPHHQSSALKKHKLVEPSKNLQENICPRHDKMMDLFCRTDQQCICSLCSVDKHK
DHDTVSAAEERTHKQRELDLSQEEVQQRLQGRDRDVKVLQQERKTLTLSADKAVKDTDEI
FTEMKRLLQKRSSDVKQQIRSKLETEVRRVTDAEEKLRQEITELKKREAELKQLSLTQDH
NQFLLNYRSLSALSPSSSIINVRPLRHFDDVTVAVAKLRGQLEDVLTETWTDISLAVAEV
DVLLTEPEPDPEPKTRAEFFGYSQEITLDPNTANKHLLLSEGNRKVTFVKENQSYPHHTD
RFTTSCPQVLSKESLTGRCYWEVEWTGEGVDVAVTYKNISRSESFFGFNDKSWALVCQQN
SCKFFHNNIWTDVSDVKVSRVGVYLDHRAGLLSFYRVSDPMTLLHRVQTTFTEPLYAGVC
FYFSPGDTAELCTQIEWNYFSSSVLNSVFKSFTSLFSRQQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttcagctgcagagagaaaacatctcatgttccatctgtttggatcttctg
aagaaacctgtaactcttaactgtggacacagcttctgtaagaactgtattaaagaccac
tgggactcagaggaggagaagaggatgtacagctgccctcagtgtagaaagatcttcata
ccgaggcctgaactgaagaaaaacaccatgttagcagatttagtggaggagctgaagaag
actggactccacgctgctcctgctcatcactgctatgctggagctgaagatgtggcctgt
gatgtctgcactggcaggaaattgaaagctctcaagtcctgtttggtttgtttggcctct
tactgcgaggaacatctccagcctcatcatcaatcatctgcattaaagaaacacaagctg
gtggagccgtccaagaacctccaggagaacatctgccctcgtcatgataagatgatggac
ttgttctgccgcactgatcagcagtgcatctgttctctctgctccgtggacaaacataaa
gaccacgacacggtctctgctgcagaagagaggacgcacaagcagagagagctggatctg
agtcaagaagaagtccaacagagactccagggcagagacagagacgtgaaggtgcttcaa
caggagaggaagactctcactctctctgctgataaagctgtgaaggacacagacgagatc
ttcactgagatgaagcgtctcctgcagaagagaagctctgatgtgaagcagcagatcaga
tccaagctggaaactgaggtgagacgagtcacagacgccgaggagaagcttcggcaggag
atcactgagctgaagaagagagaagctgaactgaagcagctctcactcacacaagaccac
aaccagtttctcctcaactaccgctcactgtcagcactcagtccatcatcgtccatcatc
aacgtccgtcctctgagacactttgacgatgtgacagtggctgtggcaaagctcagaggt
caactggaggacgtcctgactgagacgtggacagacatctcactggctgtagctgaagta
gatgttttactgacagaaccagaaccagatccagaaccaaagaccagagctgaattcttc
ggatattcacaggaaatcacactggatccaaacacagcaaacaaacatctgttattatct
gagggaaacagaaaagtgacatttgtgaaggaaaatcagtcttatcctcatcacacagac
agattcactacttcttgtcctcaggtcctgagtaaagagagtctgactggacgttgttac
tgggaggtggagtggacaggagaaggagttgatgtagcagtgacgtacaagaacatcagc
agatcagagagtttctttggattcaatgacaaatcgtgggctttagtttgtcaacaaaac
agttgtaagttttttcacaacaatatctggactgacgtctcagatgttaaagtctccaga
gtgggagtttacctggaccacagagcaggtcttctgtccttctacagagtctctgacccc
atgactctgctccacagagtccagaccacgttcactgagcctctctatgctggagtttgt
ttttatttttcacctggagacacagcagagttatgtactcaaatagagtggaattatttt
agcagcagtgtgttaaactctgtgtttaaatcttttacttctctgttctcacgacaacaa
taa
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