Solea senegalensis (Senegalese sole): 122760638
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Entry
122760638 CDS
T07721
Symbol
tnrc6c1
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122760638 (tnrc6c1)
03036 Chromosome and associated proteins [BR:
ssen03036
]
122760638 (tnrc6c1)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122760638 (tnrc6c1)
Chromosome and associated proteins [BR:
ssen03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122760638 (tnrc6c1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
UBA
RRM_1
RRM_occluded
THOC7
Motif
Other DBs
NCBI-GeneID:
122760638
NCBI-ProteinID:
XP_043871705
LinkDB
All DBs
Position
Unknown
AA seq
1854 aa
AA seq
DB search
TDSAKLNPTPPLPPISHSAAPSVAPSSGNGKHAPSGGQQQTTQQPQTLLQQRYPSREVPP
RFRQQEHKQLLKRGQALPSGSLLLTTTGRPYTTEPATAVAIHSCSSISTASLPTELPPQS
SQGAQYDNPLWGHLPANRSATSAASSTILSGWDQLIIDQKDTEAWPSITLSQSQVPPGGC
PLDTDPGHLTSSNSSTNSSCSTVTMATGANSQTGHFSASHLSSKANSGPNPASLTATSML
SGQVAANRSWASGPGTSHCPSQSSVGNEGKYDGQVGGVGSRAWGSSSQSSTTNFNLNLNP
NANPSAWPMLGHDGSGTGGGSSGGANTISPPQTTPNLCNPPGPPPSQTSTCTGANTNSNS
SGIGSAWGNIMTSDTSESHPSPSTNVSFSSEPQNLKTDGPNHTNKQEPPSPIHSLPGWGN
APVGLSSRGQLPQGGPQVNGDDCSSAWGNSVESKATSSKEAPGWDSGWGHGAGGAGNSGG
WGDQSGGEWGKQHTEEAQGGWDPPSSPPQDPQASPWSKAVSTAGASEGSSDSMEGNPQHR
DHSSRDNPAPLLPAQDLDPRVLCNTGWGQTPVRQHTSWDMDNTKRKNGVGSESWSSGPTT
PNNAQMAANTNIGPTQRTDSGGKNDVPASQGASGWGGSIVATKSPSTSWGEPPNINKPPG
TPSGWGKAPAGGSVPSVPKNGSQSWGEDKSSGWEDSHIKATPQGWGEQHKPSHSWGNSGG
SNNTGDWREPEESKKSPTNPAWEGDTGGWKENPRGWGTSASGSGISGAGGNGGWGEPISQ
RPSGPPQSWGGKPQDGPSGGGGGGSGGGSGGGGGGGGGGSIGSWGGSDSVKQGGGWGGSK
QESTTEATGWEEPSPTSVRRKMEIDDGTSAWGDPVTYNKAVNLWDRNNPGTSQAKVTSGG
NNPPGPNNNHPHSHNHPYHGPPAPLQNHSQNSQNPGPASGTMDPVVQHQPGPSHNRSPLM
AQRKQGWGEIPNSHTKSESSWGEPAPSPVSVDNGTSAWGKPIGSCGGWGDGNQDSYGRGN
PAMTSASCKPAPKPMQEGWGGGGEELSLSGGQWDAEEGDLWNSNTQENNSCNSWGNAPKK
GPPKGKVLGKQEDAWIMNRLIKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKTELD
KRGMGISGHDYNNGLINKPMTCPRPPLLSKDPSADPRLPFMDKHMQSGMFGGGGAAQART
MQQTQQPPQPPVPHLSSSQPSLRAQVPQFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQ
HMTLLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPIRQQEQQVARTINNMQQQIQQHQRQL
AQALLIKQQQQQPPPSHSGLHSGGVKSTLESFPGHPQTPGLPDLQTKEPQSSPNTYSHYS
LSGLNPNMNVNCMDVGSLSMKEPPQPQSRLSQWTHPNSIESLSGNSSPLEPGLGKHGANL
GPPGKPPQLEDSYSPYNLMSSSDSPTSPLVPPDSWGQGKSNSDKIANGSNINWPPEFCPG
VPWKGLQNIDPETDPNMTPGSVPSGPTINTNIQDVNRYLLRDRSGGSSPTSSQIEALPPS
TDWPVSAYTSSFNLSSLEADDAGKLSEMKSTWSAGPISHSQASLSHELWKVPQGPRSSTT
APSRPPPGLTNTKPSSTWGGNSLGLAQGWSSSYTTAGTTWSTDTSTRTSSWLVLRNLTPQ
IDGSTLRTLCMQHGPLITFHLNLTQGNAVVRYSSKDEAAKAQKSLHMCVLGNTTILAEFA
GEEEVNRFFAQGQSLGGTTSWQATPGANQTRMGGTGSTASHPIGHSPHWNNNNSSSSSSG
LGAGGTKSGELLWGGVQQYSSLWGPPSGEEGRVMGSPTPINTLLPGDLLSGESM
NT seq
5567 nt
NT seq
+upstream
nt +downstream
nt
tgacagattctgccaagctcaaccccactcctcctcttccccctatcagccacagtgccg
ccccgtctgtagccccaagcagtggcaatggcaagcatgctccctccggaggtcagcagc
agacaacgcagcagccccagactctgcttcagcagcgctacccatccagagaggtgcccc
ctcgcttccgccagcaggagcacaagcagctgttgaagagaggtcaggctctgccttctg
gaagtctgcttctcaccaccacaggacgtccctacactactgaacctgctacggctgtag
ccatacactcctgctcctctatctccacagccagccttcctacagaactgcccccacaga
gcagccagggagcccagtatgataatcccctctggggacacctgccagccaacaggagtg
ccacaagtgctgcatcttctacaattcttagtggttgggatcaactaatcattgaccaga
aggacacagaggcttggccttctataaccctcagccagagccaggtccctcctggaggat
gccctttggatactgaccctggtcatttgaccagcagcaacagcagtactaatagtagtt
gcagtacagtgactatggccactggggccaatagccagacaggccatttctctgccagcc
acctaagcagcaaggccaacagcgggcctaaccctgccagtcttactgcaaccagcatgc
tctctggtcaggtcgcagctaatcgcagctgggcatctggacctggaacctcccattgcc
cctcccagtcctcagtagggaatgaagggaagtatgatggtcaagtggggggagtaggca
gtagggcctggggctcttcttcacaatcttccaccaccaactttaacttgaacctaaacc
ctaatgccaacccatctgcctggcccatgttggggcatgatggaagtggcacagggggag
gcagctcagggggggccaacaccatttcacctcctcaaactacacccaacctctgtaatc
cacctggccccccaccatcccagaccagtacctgtactggagccaacactaacagcaact
cctcaggcattggcagcgcctggggtaatataatgacctctgacacatcagagtcacacc
catccccatccacaaatgtgtctttcagttcagaacctcagaaccttaaaactgatggac
caaatcacactaataaacaggaaccccccagcccaattcacagcttgcctggctggggta
atgcacctgtaggtctgagttccaggggccagctaccacaaggaggcccacaggtcaatg
gagacgactgtagctcagcatggggtaacagtgttgagtctaaggcaacttcatctaagg
aagcacctggatgggactctggctggggccatggagcaggtggagcaggaaactctggag
gctggggtgaccagtctggtggagaatggggaaagcagcacactgaagaagcccagggag
gctgggatccccccagctcccctccgcaggatccacaggctagtccttggagtaaagctg
tgagcacagctggtgccagtgaaggaagcagtgacagcatggaaggaaatccccaacata
gagaccactcatcccgagataatccagctccattgctgcctgcccaggatcttgacccca
gggtgctgtgcaacactggctggggacagacccctgttcgccagcacacctcttgggata
tggataatactaaacgcaaaaatggtgtaggcagtgagtcatggagctctggcccaacca
ctcccaacaatgcccagatggctgccaacaccaacataggtcccactcaaagaactgact
ctgggggtaaaaatgatgtgcctgcttctcagggagcttcgggttggggtggaagcatag
tagcaaccaaatcacccagcactagttggggagagccacccaacattaataaacccccgg
gcactcccagtggctggggtaaggctccagcaggaggctctgtccccagtgtacccaaaa
atggtagccagtcctggggagaagataagtcaagtgggtgggaagattctcacatcaagg
caacaccccagggctggggagagcaacacaaaccatcccacagttggggcaatagtggag
gtagcaataacacaggggactggagagaaccagaagagagtaaaaagagtcccactaatc
ctgcatgggagggagacactggtggctggaaggaaaaccctcgaggctggggaacatctg
cttcaggttcagggatatctggagctggaggaaatggtggctggggggaaccaatttctc
agcgtcctagtggccctcctcaaagttggggtggcaagcctcaggatgggcctagtggtg
gtggtggtggtggtagtggtggtggtagtggtggtggtggtggtggtggtggaggaggga
gcataggctcttggggtggctcagactcagtaaaacaaggtggaggctgggggggcagta
agcaagagtccaccactgaggctacaggctgggaagaaccctcaccaacttcagtcagac
gtaaaatggagatagatgatggaacctcagcttggggtgaccctgttacctacaacaagg
cggtcaacctgtgggacaggaacaatccaggaacgtctcaagctaaagttaccagtggag
gcaataatcccccaggccccaacaacaaccaccctcactctcataatcacccatatcatg
ggccacctgcacctttacagaaccacagccaaaactcccaaaacccggggcccgccagtg
ggaccatggatcctgttgtccaacaccagcctgggccatctcacaacaggagtcccctga
tggctcaacggaagcaaggttggggagagatacccaactcccacacaaaatcagagagct
cttggggggaacctgcaccctctccagtcagcgtagacaatgggacatctgcctggggca
aacctattgggagctgtggaggttggggagacggtaaccaagacagctatggaaggggca
acccagctatgacatctgcatcttgcaaacctgctcccaaacctatgcaagaaggatggg
gaggtggaggcgaggagctgagcttgtcggggggccaatgggatgctgaggaaggagact
tatggaacagcaacacccaggagaacaactcctgtaactcttggggcaatgctcccaaaa
agggcccaccgaaggggaaggttctggggaagcaagaagatgcctggatcatgaatcgtc
tcatcaaacagctgacagacatgggcttccctagggagccagcggaggaagctctgaaga
gcaacaacatgaacttggaccaggccatgagtgccctgctggagaagaagacagagctgg
acaagcggggaatggggatatctggccacgactacaacaacgggcttatcaacaagccca
tgacctgccctcggcctccgcttctttccaaagacccctcagcagacccccgcttgccct
tcatggataagcatatgcagagtggaatgtttggcggtggtggagcagcacaagccagga
ccatgcagcagacacagcagcctcctcagccgccagtgccgcatctcagctcttctcagc
ctagtctgcgtgctcaagtgcctcagtttctctcccctcaggttcaagcacagctcttac
agtttgcagcaaaaaacattggtctgaatcctgcacttttaacttcaccaataaaccctc
aacacatgacccttctgaatcaactttaccagctgcaactggcataccagcgtttacaaa
ttcagcagcagatgttgcaggctcagcgcaatgtttctggtcccattcgacaacaagagc
agcaagttgcacgtacaatcaataacatgcagcagcagatccagcagcaccagcgtcagc
tggcccaggccctgctgattaagcagcagcaacagcagccgccaccctcccactctggcc
tacactctggtggggtcaaatccaccctggaatcatttccaggtcacccccagactccag
gtctccctgatctgcagaccaaagagccgcagtcatctcccaatacctacagccactact
ctctctctggactgaatccaaacatgaatgtaaactgcatggacgtgggaagtctgtcta
tgaaggaaccccctcagccccaatcacgcctgtcacagtggacacacccaaactccattg
aaagcctctctggtaactcctctcccctagagcccggcctgggcaagcatggtgccaact
tgggtccccctggtaagcccccacagctggaggactcttacagtccatacaacctcatgt
ccagctcagactctcccaccagccccctggtccccccagacagctggggacagggcaaaa
gcaacagtgacaagatagccaatgggtccaatatcaactggcctccagagttctgccctg
gtgtgccatggaagggcctccagaatatcgaccctgagactgaccccaatatgaccccag
gcagtgtccccagtgggcccaccatcaataccaacatccaagatgtcaaccgctacctgc
tgcgggacaggagtggaggctcctcacccacttcatctcagatcgaggctctgcctccct
ccactgattggccagtcagtgcctacactagctcattcaatctgtcctccctggaggcgg
acgatgcaggtaaactgtcagagatgaaatctacttggtctgcaggacccatctctcata
gccaggcttctctgtcccacgagctttggaaggtcccccagggcccccgcagtagcacca
cagccccttcacgtcccccacctggtctcactaacaccaagccttcctcaacatgggggg
gcaactccctgggtctggctcaaggctggagcagctcttacaccacagcaggtaccacgt
ggagtacagacacctccaccaggaccagtagctggctggttctgaggaacctcactccac
agattgatggttcaactctgcgcacactgtgcatgcagcatggccccctcatcacattcc
acctcaacctgacacagggcaatgctgtggtgcgttacagctccaaggatgaagctgcca
aggcacagaagtccctgcacatgtgcgtgcttgggaacaccaccatcttggcagagtttg
ctggggaggaggaagtgaatcgcttctttgcacagggccagtcgcttggtggaacaacca
gctggcaggccactccgggcgccaatcagacaaggatgggtgggacagggtctacagcat
ctcatcccatcggtcactcaccccactggaacaacaacaatagcagcagcagtagcagtg
gccttggagcaggcggaacaaagagtggggagttgctttggggtggagtgcaacagtatt
ctagcctgtggggacccccaagtggagaagaaggacgggtcatggggagtcccaccccaa
tcaatacgctgctgcctggtgacctgctgagtggagagtccatgtag
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integrated database retrieval system
