Solea senegalensis (Senegalese sole): 122762880
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Entry
122762880 CDS
T07721
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122762880
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122762880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_10
zf-ANAPC11
U-box
Motif
Other DBs
NCBI-GeneID:
122762880
NCBI-ProteinID:
XP_043873990
LinkDB
All DBs
Position
LG2:35235848..35237326
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AA seq
413 aa
AA seq
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MAGVQLQRETLSCSICLDLLKDPVTLTCGHSFCMNCIKDHFDTEDEKRIYSCPECRKTFM
PRPELLKNVMLADLVEKLKKTGLHAAPADHCYAGAEDVACDVCTGRKLKALKSCLVCLAS
YCEEHLQPHHQAPPLKKHKLVEPSKNLQENICPLHDEVMKMFCRTDQQCICYLCSVDEHK
DHDMVSAAAERKQKQRELDLSREEVQQRVQDIVRDVKVLQQEEEALTLSADKAVKDTDES
FTEMMGLLQRRSSDVKQQIRSKQETEVRRVKDLQEKLQQELNELKKREAELKQLSLTQDH
NQFLLNYRSLSALSPSTHSSTVHVRPLRHFEDVTAAVAKVRGQLQDVLTKTWANVLVAVA
RVDVLLTEPKPETRAEFIPDPYMHNLLVHHMHDFDDEEDEEFIFASPTESLTP
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttcagttgcagagagaaaccttgtcttgttccatctgtttggatcttctg
aaggatccggtgactcttacctgtggacacagcttctgtatgaactgtattaaagaccac
tttgacacagaggatgagaagaggatctacagctgccctgagtgtagaaagacctttatg
ccgaggcctgaactgttaaaaaacgtcatgttagcagatttagtggagaagctgaagaag
actggactccacgctgctcctgctgatcactgctatgctggagctgaagatgtggcctgt
gatgtctgcactggcaggaaactgaaagctctcaagtcctgtttggtttgtttggcctct
tactgtgaggaacatctccagcctcatcatcaagcacctccattaaagaagcacaagctg
gtggagccgtccaagaacctccaggagaacatctgtcctcttcacgatgaggtgatgaag
atgttctgtcgcactgatcagcagtgcatctgttatctctgctctgtggacgaacataaa
gaccacgacatggtctcagctgcagcagagaggaagcagaagcagagagagctggatctg
agtcgagaagaagtccagcagagagtccaggacatagtcagagacgtgaaggtgcttcaa
caggaggaggaggctctcactctctctgctgataaagctgtgaaggacacagacgagagc
ttcactgagatgatgggtctcctgcagagaagaagctctgacgtgaagcagcagatcaga
tccaagcaggaaaccgaggtgagacgagtcaaagatcttcaggagaaacttcagcaggag
ctcaatgagctgaagaagagagaagctgaactgaagcagctctcactcacacaagaccac
aaccagtttctcctcaactaccgctcactgtcagcactcagtccatcgacacactcgtcc
actgtccacgtccgtcctctgagacactttgaggatgtgacagcggctgtggcaaaggtc
aggggtcaactgcaggacgtcctgaccaagacgtgggcaaacgtcttagtggctgtggct
cgagtagatgttttactgacagaaccaaaaccagagaccagagctgaattcataccggat
ccatacatgcataacctgctggttcatcatatgcatgactttgatgatgaggaggatgag
gagtttattttcgcttctcctacagaatctctgacaccatga
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