Solea senegalensis (Senegalese sole): 122766317
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Entry
122766317 CDS
T07721
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122766317
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122766317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-C3HC4
SPRY
zf-B_box
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_6
zf-RING_5
zf-RING_10
COG6_N
SseC
Fib_alpha
U-box
Exonuc_VII_L
PI3K_P85_iSH2
MIC19_MIC25
DUF948
PRP1_N
DUF6175
Dna2
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
122766317
NCBI-ProteinID:
XP_043877019
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Position
LG3:1931322..1933433
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AA seq
549 aa
AA seq
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MERGRISCSICLDLLKEPVTLTCGHSFCKNCIKDHWDSEDEKRIYSCPQCREAFRSRPEV
KKNTMLADLVEELKKTGLHSAPAEHCYAGAEDVACDVCTGRKLKALKSCLVCLASYCEEH
LQPHRHSPPLKKHKLVEPSENLQENICSRHDEVMKMFCRTDQLCICYLCSVDEHEGHDTA
TAAAERVQKQSDLQRSLQEVQQRLQDRGKDMKALRQGVEALNRSADKAAEDTDEIFTEMT
RLLQRRSSDVKQQIRSEQETEVSRVRDIEEKLQREIAELKKREAELKRLLLTHDHNHFLL
KYRSLSALSPSTHSSTSIKIRPLRHLEDMTAAVTKLRGQLKVLLSETRVDVPLPHPQPKT
RAEFLTHSQEITLDPNTVNAWMSLSEGNMKVTVVKENLPYPRHPDRFTDDYQVLSGQSVS
GRCYWEVEWRGGGVSVAVAYKNIRRSGGSSGGCGFGFNDKSWAMYCYRDSCNFGHNRVWT
RVSGGLTSRIGVYLDQNAGRLSFYRVSNDTMTLLHRVHATFTQPLYAGVGFNYDLFYLPG
DTAEFCQLK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagggagaatcagctgttcgatctgtctggatcttctgaaggagccagtgact
cttacctgtggacacagcttctgtaagaactgtattaaagaccactgggactcagaggat
gagaagaggatctacagctgccctcagtgtagagaggccttcaggtcaagacctgaggtg
aagaaaaacaccatgttggctgatttagtggaggagctgaagaagaccggactccactct
gctcctgccgagcactgctatgccggagctgaagatgtggcctgtgatgtttgcactggc
aggaaactgaaagcactcaagtcctgtttggtttgtttggcctcttactgtgaggaacac
ctccagcctcatcgtcactcgcctccattaaagaagcacaagctggtggagccctccgag
aacctccaggagaacatctgttcccgtcatgacgaggtgatgaagatgttctgccgaaca
gatcagctgtgcatctgttatctctgctcggtggatgaacatgaaggccacgacacggcc
acggccgcggcggagagggtgcagaagcagagcgacctgcagcggagtctccaagaagtc
cagcagagactccaggacagaggcaaagacatgaaggcgctgcgacagggggtggaggct
ctgaatcgctctgctgacaaagccgcggaagacacagacgagatcttcaccgagatgacg
cgtctcctgcagaggagaagctccgacgtgaagcagcagatcaggtcggagcaggaaacc
gaagtgagtcgagtcagagacatcgaggagaagctacagcgggagatcgcagagctgaag
aagagagaagctgaactgaagcggctcttactcacacacgaccacaaccactttctcctc
aaataccgctcgctgtctgcactcagtccgtccacacactcgtccaccagcatcaaaata
cgtcctctgagacacttagaggacatgacagcagctgtaacaaagctcagaggtcaacta
aaggtcctactgagcgagactcgagtggacgtcccgctgccacacccacaaccgaagacc
agagccgagttcctcacacattcacaggaaatcactctggacccaaacacggtgaacgcg
tggatgtcgttgtctgagggaaacatgaaggtcaccgtcgtgaaggagaacctgccgtat
cctcgtcacccggacagattcactgacgattatcaggtgctgagtggacagagcgtgagt
ggacgctgttactgggaggtggagtggagaggaggaggagtcagcgtcgccgtcgcgtac
aagaacatcagacgatcaggagggtcgtcgggtggatgtgggtttggattcaacgacaaa
tcctgggctatgtattgttaccgcgacagctgtaactttggccacaacagagtctggacc
agagtctcgggcggtctgacctccagaatcggagtctacctggaccagaacgcaggtcgc
ctgtccttctacagagtctccaatgacaccatgactctgctccacagagtccacgccacg
ttcactcagccactctacgccggagttggatttaactacgatcttttctatttgcccgga
gacacggccgagttctgtcaactcaaataa
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