Solea senegalensis (Senegalese sole): 122767729
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Entry
122767729 CDS
T07721
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122767729
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122767729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
SPRY
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-RING_10
CC149
U-box
MIC19_MIC25
CoV_S2
SPAM
DUF6016
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
122767729
NCBI-ProteinID:
XP_043879119
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Position
LG4:complement(30619..32573)
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AA seq
561 aa
AA seq
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MAAVQLQRENISCSICLDLLKDPVTLTCGHSFCKNCIKDHWDSEEQKRSYSCPQCREAFM
PRPELKKNVMLADLVEELKKTGLHAAPADHCYAGAEDVACDVCTGRKLKALKSCLVCLAS
YCEEHLQPHHQAPAFKKHKLVEPSKNLQKNICPCHDKMMDLFCRTDQQCICSLCSVDEHK
DHDTVSVAAERTHKQRELDLSREEVQQRLQDIDRDVKVLQQERKTLTLSADKAVKDTDES
FTEISRLLQRRSSDVKQQIRSKLETEGRRVTDAEEKLQQEITELKKREAELKQLSLTHDH
NQFLLNYHSLSALSPSLSTIHVRPLRHFEDVTEAVAKVRGQLQDVLTETWKYISLAVAEV
DVLLTEPEPETRAESFKYSQEIKLDPNTAHTELLLSEGNRKVTVTYEDQSYSHHTDRFTD
YLQVLSKESLTGCYWEVEWTGRGGVYVAVTYKNISRSGPESLFGNNNKSWGLVCDQNSCQ
FGHNRIWTDVSDVTVSRVGVYLDHRAGLLSFYRVSDTMTLLHRVQATFTQPLYAGVGFLY
FYSSPGDTAEFCELKEFFQEK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagttcagctgcagagagaaaacatctcttgttccatctgtttggatcttctg
aaggatcctgtgactcttacctgtggacacagcttctgtaagaactgtattaaagaccac
tgggactcagaggagcagaagaggagctacagctgccctcagtgtagagaggcctttatg
ccgaggcctgaactgaagaaaaacgtcatgttagcagatttagtggaggaactgaagaag
actggactccacgctgctcctgctgatcactgctatgctggagctgaagatgtggcctgt
gatgtctgcactggcaggaaactgaaagctctcaagtcctgtttggtttgtctggcctct
tactgtgaggaacatctccagcctcatcatcaagcacctgcctttaagaaacacaagctg
gtggaaccatccaagaacctccagaagaacatctgcccttgtcatgataagatgatggac
ttgttctgccgcactgatcagcagtgcatctgttctctctgctctgtggacgaacataaa
gaccacgacacggtctcagttgcagcagaaaggacgcacaagcagagagagctggatctg
agtcgagaagaagtccagcagagactccaggacatagacagagacgtgaaggtgcttcaa
caggagaggaagactctcactctctctgctgacaaagccgtgaaggacacagacgaaagc
ttcactgagatctcacgtctcctgcagaggagaagctctgacgtgaagcagcagatcaga
tccaagctggaaactgaggggagacgagtcacagacgccgaggagaagcttcagcaggag
atcactgagctgaagaagagagaagctgaactgaagcagctctcactcacacacgaccac
aaccagtttctcctcaactaccactcactgtcagcactcagtccatcattgtccaccatc
cacgtccgtcctctgagacactttgaggacgtgacagaggctgtggcaaaggtcagaggt
caactgcaggacgtcctgaccgagacgtggaaatacatctcactggctgtggctgaagta
gatgttttactgacagaaccagaaccagagaccagagctgaatccttcaaatattcacag
gaaatcaaactggatccaaacacagctcacacagagctgttattgtctgagggaaacaga
aaagtgacagtaacgtatgaagatcagtcttattctcatcacacagacagattcactgat
tatcttcaggtcctgagtaaagagagtctgactggatgttactgggaggtggagtggaca
ggaagaggaggagtttatgtagcagtgacgtacaagaacatcagcagatcaggtccagaa
agtttatttggaaacaataacaaatcttggggtttagtttgtgaccaaaacagttgtcag
tttggtcacaacagaatctggactgacgtctcagatgttacagtctccagagtgggagtt
tacctggaccacagagcaggtcttctgtccttctacagagtctctgacaccatgactctg
ctccacagagtccaggccacgttcactcagcctctctatgctggagttggttttctttat
ttttattcttcacctggagacacagcagagttctgtgaactcaaagagttctttcaggag
aagtga
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