Solea senegalensis (Senegalese sole): 122767971
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Entry
122767971 CDS
T07721
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122767971
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122767971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_6
MIC19_MIC25
Exonuc_VII_L
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
122767971
NCBI-ProteinID:
XP_043879484
LinkDB
All DBs
Position
LG4:24947439..24949112
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AA seq
557 aa
AA seq
DB search
MDENVDQLEWETFSCPMCLDLLKDPVAIFCGHSYCMNCIQSHWDTESGIYSCLQCTQTVL
GRPRLMKNILLADLVEQLRKSAVQAAPADHCYAGAEDVSCDVCTGRKLKAAMSCLNCLAS
YCEKHLQPHYESPPFKKHKLVDPCKKLQENICPQHNKMMDMFCFTDHQHVCYLCSVDKHK
GHDTVTAAAGRMQKQKELDLSLEEIQQRLQDRKKDVEMIEQKGKDVNLSVFRALEDNENI
FTELIQLLKKTRSGVMQRLRSQHEPEERRFKDLQEKLQQEITELKRKVTELKQLSLIQDH
NQFLLNYCSLSAALGPSTHSSSINIAPARFCEDVTAALSQVRGQVQDVLTRTWTHIGLTL
NQDDVLLPQPEPRTRVEFLQYSREITMDPNTLNTWIILSEGNRKVTLMNHRQSYSTHPDR
FTDWYQVLSRESLTGQCYWEVEYRGLGVYVAVTYKTFRRAGKSVKGVFGFNDKSWALCLG
SRCYYLLHSSISTKVSDGLSSRLGVYLDHSAGLLSFYSVSNTMTLLHRVQTTFTQPLYVG
VGFKHYLPGATAEFCDV
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaacgtagatcagctggagtgggagaccttttcttgtccaatgtgtctggat
ctgctgaaagatccagttgctattttctgtggacacagctactgtatgaactgcattcaa
tcccactgggacacggagagtgggatttacagctgccttcagtgcacacagaccgtcctt
ggaagaccgagactgatgaagaacatcttgttagcagatctggtggagcagctgaggaaa
agtgcagtccaagctgctcctgctgatcactgctatgctggagctgaagatgtgtcctgt
gacgtctgcactggcaggaaactgaaagctgccatgtcctgtttgaactgtttggcctcg
tactgtgagaaacacctccagcctcattatgaatcccctccatttaaaaaacacaagctc
gtggacccctgcaagaagctccaggagaacatctgcccccaacacaataagatgatggac
atgttctgcttcactgatcaccagcatgtctgttatctctgctctgtggacaaacacaaa
ggtcacgacacagtcacagctgcagcaggaaggatgcagaagcagaaagagctcgatctg
agtctcgaagaaatccagcagaggctccaggaccgaaagaaagacgtggagatgattgaa
cagaaagggaaggacgtcaatctctccgtgtttagagccctggaggacaatgagaacatc
ttcactgagctgatccaactcctgaagaaaacacgctctggtgtgatgcagcggctcaga
tcccagcacgagcctgaagagagaagattcaaagatcttcaggagaagctgcagcaggag
atcactgagctgaagaggaaagtcactgaactgaagcagctgtcactcatacaggatcac
aaccagttcctactcaactactgctcactgtcagcagcactcggtccgtccactcactcg
tccagcatcaacatcgctcctgcgagattctgcgaagacgtgaccgctgctttgtcacag
gtcagaggccaagtacaggacgttctgaccaggacatggacacacattggactgacattg
aatcaagatgatgttttactgccacaaccagagcccaggaccagagtggaattcttacag
tattcacgggaaatcacgatggatccaaacacattaaacacatggataatattatctgag
ggaaacagaaaagtgacattaatgaatcacagacagtcttattctactcacccagacaga
tttactgactggtatcaggtcctgagtcgagagagtctgactggacagtgttactgggag
gtggagtatcgaggattaggagtttatgtagcagtcacatacaagaccttcaggagagca
gggaaatcggtgaaaggtgtatttggattcaatgacaaatcatgggcgttatgtcttggc
tcccgttgctattacttacttcatagcagtatcagcacaaaagtctcagatggattgtcc
tccagactaggagtgtacctagaccacagtgcaggtcttctgtcgttttacagcgtctcg
aacaccatgactctcctccacagagtccagaccacattcacccagcctctctatgttgga
gtcgggtttaagcattatcttcctggagccactgccgagttctgtgacgtgtaa
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