Solea senegalensis (Senegalese sole): 122769319
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Entry
122769319 CDS
T07721
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122769319
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122769319
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-B_box
SPRY
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
U-box
PknG_rubred
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
122769319
NCBI-ProteinID:
XP_043881704
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Position
LG5:22162226..22164525
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AA seq
558 aa
AA seq
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MAGVQLQRESFSCSICLDLLKDPVTLNCGHSYCMNCIKDHWDSEEQRRSYSCPQCREAFT
LRPSLKKNTMLADLVDELKKTGLKAAPADHCYAGAEDVACDVCRKRKLKALKSCLVCLVS
YCEEHLDSHYQSPAFKKHKLVEPYKNLQENICPHHDRVMDLFCRTDQQCICYLCSVEEHK
DHDKVSAAAERTQKQRELELSLEEVQQRLQDRDVKVLQQEVEAFNLTFSADKAVKDTDEI
FTETMRLLLSSSSDVKQQIRSKLETEVSQVRDAEEKLQQEITELKKREAELKQLSLTHDH
NQFLLNYRSLSALSPSTHSSTTHVFPLRRFEDVAAAVAKFRGQLQDVLTEMWTDISLAVA
EVDVLLAEPEPKTRAEFIRYSQEVTLDPNTVNKYLLLSEENRKVSLMMEKQSYPHHTDRF
TDVCQVLSKESLTGCCYWEVEWRGTGVDIAVAYSRSGSSHKCGFGFNDKSWALVSNHNGC
VFRHNGNSVKVSDGLSSRVGVYLDYRAGLLSFYRVSDTMTLLHRVQTTFAQPLCAGVWLY
PSPGVTAEFCKLKIRAVS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagttcagctgcaaagagaaagcttctcttgttcgatctgtttggatcttctg
aaggatccggtgactcttaactgtggacacagctactgtatgaactgtattaaggaccac
tgggactcagaggagcagaggaggagctacagctgccctcagtgtagagaggccttcaca
ctgaggccttcactgaagaaaaacaccatgttagcagatttagtggacgagctgaagaag
actggactgaaggctgctcctgctgatcactgctatgctggagctgaagatgtggcctgt
gatgtctgcaggaagaggaaactaaaagctctaaagtcctgtttggtttgtttggtctca
tactgtgaggaacatctcgattctcattatcaatcacctgcatttaagaaacacaagctg
gtggagccctacaagaacctccaggagaacatctgccctcatcatgatagggtgatggac
ttgttctgccgcactgatcagcagtgcatctgttatctctgctctgtggaagaacataaa
gaccatgacaaggtctcagctgcagcagagaggacgcagaagcagagagagctggagctg
agtctagaggaagtccagcagagactccaggacagagacgtgaaggtgcttcaacaggag
gtggaggctttcaatctcactttctctgctgataaagccgtgaaggacacagacgagatt
ttcactgagacgatgcgtctcctgctgagcagtagctctgacgtgaagcagcagatcaga
tccaagctggaaactgaggtgagtcaagtcagagacgccgaggagaagcttcagcaggag
atcactgagctgaagaagagagaagctgaactgaagcagctctcgctcacacacgaccac
aaccagtttctcctcaactaccgctcactgtcagcactcagtccatcgacacactcgtcc
accacccacgtctttcctctgagacgctttgaggacgtggcggcagctgtggcaaagttc
agaggtcaactgcaggacgtcctgaccgagatgtggacagacatctcactggctgtggct
gaagtagatgttttactggcagaaccagaaccaaagaccagagctgaattcatcagatat
tcacaggaagtcacactggatccaaacacagtaaacaaatatctgttattatctgaggaa
aacagaaaagtctcattaatgatggaaaaacagtcttatcctcatcacacagacagattc
actgatgtgtgtcaggtcctgagtaaagagagtctgactggatgttgttactgggaggtg
gagtggagaggaacaggagttgatatagcagtggcgtacagcagatcagggagttcacat
aaatgtggatttggattcaatgacaagtcttgggctttagttagtaaccacaacggttgc
gttttccgtcacaacggtaacagcgttaaagtatcggatggtttgtcctccagagtggga
gtttacctggactacagagcaggtcttctgtccttctacagggtctctgacaccatgact
ctgctccacagagtccagaccacgttcgctcagcctctctgtgctggagtctggctttat
ccttcacctggagtcacagcagagttctgtaaactcaagataagagcagtgagttaa
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