Solea senegalensis (Senegalese sole): 122772078
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Entry
122772078 CDS
T07721
Symbol
usp47
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122772078 (usp47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122772078 (usp47)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122772078 (usp47)
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122772078 (usp47)
Ubiquitin system [BR:
ssen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122772078 (usp47)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
TFIIA
Tra1_central
Motif
Other DBs
NCBI-GeneID:
122772078
NCBI-ProteinID:
XP_043885684
LinkDB
All DBs
Position
LG7:2146169..2162992
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AA seq
1381 aa
AA seq
DB search
MEMVPSEENQFVSKEIQNAAEEPRVLCIIQDTTCAKTINERVTINLPASTALSRLYEDIA
HKAGYVNGSFTLVWGNKVDMAPLDHNSEMSLSDSGFEPGGKKNFLQLTDKDGEQPQMASD
ESGAADSSGLDDSSQERFIGPLPRDSTPGCSGDYSSSSYSYSSILNKSETGYVGLVNQAM
TCYLNSLLQTLFMTPEFRNALYNWEFEESEEDPVTSIPYQLQRLFVQLQTSKKRAIETTD
VTRSFGWDSSEAWQQHDIQELCRVMFDALEQKWKQTEQADLINQLYQGKLKDYVRCLECG
YESWRIDTYLDIPLVIRPFGVNQAYGSVEEALQAFVQPETLDGPNQYFCERCKKKCDARK
GLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDSMTFPEELDMSPFIDVEDEKSPQTESCT
DSGAENEGSCHSDQMSNDFSTDDCVDEGICLDSTGSTERVLKPKSSLNFELFSVMVHSGS
AAGGHYYACIKSFSDGQWYSFNDQHVSKITQDDIRKTYGGSSGSRGYYSSAFASSTNAYM
LIYRLKDPSRNAKYSAVEDFPEHIKCLVQKEKESEEQEKRQREIERNTCKIKLFCMHPVK
MMMESKLEVHKDKTLREATEMAFKLMELEGVVSLDCCRLVKYDEFHEYLERSYEGEEDTP
MGLLLGGVKSSYMFDLLLETRRPDQVFQPYKPGEVMVKVHVVDLKSETIASPISVRAYLN
QTITEFKQLIAQATGLSAENMRVVLERCYNDLRLLYVPNKTLKAEGFFRSNKVFVESSES
SDHQVAFTDSVLWKLLDRHGNTIRLLVLLPEQSPGTLANRTLSQKEGGDSDVPSDESKGT
RKSVEAILEESTEKLKNLSLQQQQQQQQQQQQQQQQQQQGSSTSTSDSQKSSDTSDFEHI
ESPTQEADSNSSLCVAADSRELENRIKTTAGSSGGASSEPENHFASEERSDSEVNNDRST
SSVDSDILSSSHSSDTLCNADSGPIQLANGLDSHSITSSRRSKAHEGKKETWDTAEEDSG
TDSEYDDNGKSKAEAQYLYFRAEPCTQDESTWDAQKCLVVHVDKRITLAAFKQNLEPYVG
VASTQFKVFRVYANNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNE
TEPCKFLVDTVFAKGMTVRQSKEELLPQLKEQCKLDLSIDRVRLRKKTWKNPGTVFLDYH
VYEEDISISSNWEVFLEVLNEPEKMKSMSQLAVLTRRWSPATMKLEPFQEVILESSSVEE
LKERLSEMSGIPLENLEFAKGRGTFPCDISVLEIHQDLDWNPKVSTLNVWPLYICDDGAV
VCYRNSTEEPMELSEDERSELMKKESSRLLKTGHRVSYSPRKEKALKIYLDGGPAKDPGQ
D
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgccgagcgaggagaatcagttcgtatccaaagagatccagaatgcagca
gaagagcccagagtgctgtgcattatccaggacaccacctgtgcaaagaccatcaatgag
agggtgaccatcaacctgcctgcttccacagcactctccagactctatgaagacattgcc
cacaaagcaggatatgtcaatggctccttcacccttgtctggggaaataaagtggacatg
gcaccactggatcataacagtgagatgtccctctcagactctgggtttgagcctggtggt
aaaaagaattttctccagctgacagacaaagatggagagcagccacagatggcgtcggat
gagtcgggagcagctgacagcagtggactggatgacagttcccaggagcgcttcattggt
cctcttccaagagacagcactccaggctgcagtggtgattacagcagttcatcttactcc
tactcatccatcctcaacaaatctgagacgggttacgtgggtttagttaaccaagctatg
acctgctatttgaacagtcttctgcagacgctgttcatgactccagagttcagaaatgct
ctctacaactgggagtttgaggagtcagaggaggatccagtcaccagcatcccctaccag
ctgcagcggctgtttgtccagctgcagaccagtaaaaaacgtgcgattgagaccactgat
gtgacccggagctttggctgggacagcagcgaggcgtggcagcagcatgacatccaggag
ctgtgcagggtcatgtttgatgctctggaacaaaagtggaagcaaacagagcaggctgac
ctgatcaaccagctgtaccaggggaaattgaaggattatgtgcgttgtctggagtgtggc
tacgagagctggaggattgatacctacctggacatccctcttgtgatcagaccctttgga
gtcaaccaggcctatggcagtgtggaggaggctctgcaggcatttgttcaaccagaaact
ctggatgggcccaaccagtatttctgtgaacgctgcaaaaagaaatgtgacgcccggaag
ggtctaagatttctgcactttccctacctgctgacactgcagctgaaacggtttgatttt
gactacaccactatgcatcgcatcaagctcaacgacagcatgactttccccgaggagctg
gacatgagtccgttcatcgacgtggaagatgagaagtcgcctcagacggagagctgcact
gacagcggcgctgagaatgaaggcagctgccacagcgatcagatgagcaatgacttttcc
actgatgactgcgtggacgagggcatctgcttggacagcactggcagcacagagagggtg
ttgaagccaaagagttcgttgaactttgagctgttctccgtcatggtccattccgggagt
gctgcgggtggccattactatgcctgcatcaaatcctttagtgatggccagtggtacagt
ttcaatgatcaacatgttagcaagatcacccaggacgatataagaaagacatacggcggg
tcctcagggagcagaggctattattccagtgcctttgcaagctctacaaatgcatatatg
ctgatttatagattgaaagacccctcaaggaatgcaaagtattcagctgtagaagacttc
ccagagcacataaagtgtttggttcagaaggagaaggagtctgaggagcaggaaaagaga
cagcgggagattgagcgcaatacctgcaagatcaagcttttttgcatgcatcctgtgaag
atgatgatggaaagcaagctggaagttcacaaggacaaaacactcagagaggcaacagaa
atggcctttaagctgatggagcttgagggagtcgtctctctggactgttgtcgcttggtg
aagtacgacgagttccacgagtacctggagcgctcgtatgaaggtgaggaggacacacca
atgggtctgctgctgggtggagtcaagtcctcatacatgtttgacttgctgctggagacg
cggcggccggatcaagtgttccagccgtacaaacccggagaggttatggtgaaggttcat
gttgtggatctgaagagtgagaccattgcctccccaatcagcgtccgggcgtacttgaac
cagacaatcactgaattcaaacagcttattgcacaggcgacaggtctgtctgcagaaaac
atgcgtgtagtcctggagcgctgctataatgaccttcgcctcctctatgttccaaacaag
accttgaaagctgagggatttttcaggagtaacaaggtttttgttgagagctccgagtcg
tctgatcatcaggttgcgttcactgactccgtcttgtggaaactgttggatcgtcatggg
aatacaatccgactgttggtcttactgcctgaacagtcacccggaaccttggccaacaga
actctgagccagaaagagggcggtgactctgatgtgccctctgatgagtccaagggtacc
aggaagtctgtggaggctatactcgaggagagcacagaaaagttaaagaatctgtcgttg
cagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagcagggc
tccagcaccagcaccagcgacagccagaaaagctctgacaccagtgactttgaacatatc
gagtccccaacacaagaggccgactctaactcttcactctgcgtggccgcagacagcaga
gagctggagaaccggatcaagaccacggctgggagcagtggtggcgcctcctctgaacca
gagaaccactttgccagtgaggagcgctcagactctgaggtgaacaatgaccgcagcacc
agctcggtcgacagtgacatcctcagctccagccacagtagtgacacgctgtgtaacgca
gacagcgggcccatacagttggccaatggcctggactcgcacagcatcacaagtagccgg
cgctccaaagcccacgagggcaagaaagagacgtgggacacggctgaggaagactctgga
acggacagcgagtatgacgacaatgggaagagcaaagcagaagctcagtacctgtacttc
agagcggagccgtgtactcaggatgaatccacgtgggatgcacaaaaatgtttagttgtt
catgtggacaagagaataacgttagcagcgttcaagcagaacctggagccgtatgtgggc
gtggcctccacccagttcaaggtgttccgcgtctacgccaacaaccaggagtttgagagc
gtgcggctgaacgagactctgtcatcgttttctgacgataacaagataaccattcgactt
ggaagagcactgaaaaagggggaatacagagtcaaagtgtatcaactactagtgaatgaa
acagagccctgcaagttcctcgtggacacagtgtttgctaagggcatgactgtgagacag
tccaaagaggagctgctccctcagttgaaagagcagtgcaagctcgacctcagcatcgac
agggttcgtctcaggaaaaagacgtggaagaatcctggcaccgtgttcctggattaccac
gtctatgaggaggacatcagcatatcgtccaactgggaagttttcctggaagttctcaat
gaaccagagaaaatgaagtccatgtcacagctggctgttctgacccggagatggagcccg
gccacgatgaagctggagccttttcaggaagtgattctggagagcagcagtgttgaagag
ctcaaggagaggctcagtgaaatgagtggcattcctcttgaaaacctggagtttgcaaag
ggcagaggaacttttccttgtgatatttccgtgctggagatccaccaggatctggactgg
aacccgaaggtgtcgacgctcaatgtgtggcctctgtacatctgtgatgatggagctgtc
gtctgctacaggaacagcacagaggagcccatggagctgtcggaggacgagcgcagtgag
ttgatgaaaaaggagagcagccgcctgctcaagactggacaccgcgtcagctactctcca
cgcaaggagaaagccctgaagatctacctggatggaggccccgccaaagacccggggcag
gactga
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integrated database retrieval system
