Solea senegalensis (Senegalese sole): 122772156
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Entry
122772156 CDS
T07721
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122772156
Ubiquitin system [BR:
ssen04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122772156
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
SPRY
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-RING_6
zf-RING_4
U-box
CoV_S2
Pneumo_ncap
DUF6591
Motif
Other DBs
NCBI-GeneID:
122772156
NCBI-ProteinID:
XP_043885822
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Position
LG7:7780504..7782667
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AA seq
554 aa
AA seq
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MAGVQLHRETFSCSICLDLLKVPVTLTCGHSFCMDCIKDHWDSEEQKRIYSCPQCRELFM
PRSELKKNTMLADLVEELKKTGLHAAPADHCYAGAEDVACDVCTGRKLKALKSCLVCLAS
YCEEHLQPHHQSPAFKKHKLVEPSKNLQENICPRHDEVMKMFCRTDQQCICYLCSVDQHK
DHDTVTAAAERTEKQRKLDLSQEEVQQRLQDRDRDVKVLQQERKTLSLSADKAMKDTDEN
FTEMMGLLQKRSSDVKQQIRSKLETEVRRVTDAEEKLQQEITELKKREAELKQLSLTHDH
NQFLLNYRSLSALCPSTHSSTINVRPLRHFEDVTAAVAKFRGQLQDVLTETWTNISLAVT
RVDVLLTEPELKTRAEFFRYSQEITLDPNTANTRLLLSEGNRKVTLTCEDQSCPRHTDRF
TGYLQVLSKESLTARCYWEVEWTGGGRVAVTYKNISRSGSDECAFGYNDKSWALDFYQNY
FQFGHNRIWTEVSDGLSSRVGVYLDHRAGLLSFYRVSDTMSLLHRVQTTFTQPLYAGVYL
YPSPGDTAEFCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagttcagctgcacagagaaaccttctcttgttccatctgtttggatcttctg
aaggttccggtgactcttacctgtggacacagcttctgtatggactgtattaaagaccac
tgggactcagaggagcagaagaggatctacagctgccctcagtgtagagagctcttcatg
ccgaggtctgaactaaagaaaaacaccatgttagcagatttagtggaggagctgaagaag
actggtctccacgctgcacctgccgatcactgctatgctggagctgaagatgtggcctgt
gatgtctgcactggcaggaaactgaaagctctcaagtcctgtttggtttgtttggcctct
tactgtgaggaacatctccagcctcatcatcaatcacctgcatttaagaaacacaagctg
gtggagccatccaagaacctccaggagaacatctgccctcgtcacgatgaggtgatgaag
atgttctgccgcactgatcaacagtgtatctgttatctctgctctgtggaccaacataaa
gaccacgacacggtcacagctgcagcagagaggacggagaagcagagaaagctggatctg
agtcaagaagaagtccagcagagactccaggacagagacagagacgtgaaggtgcttcaa
caggagaggaagactctcagtctatctgctgataaagccatgaaggacacagacgaaaac
ttcactgagatgatgggtctcctgcagaagagaagctctgatgtgaagcagcagatcaga
tccaagctggaaactgaggtgagacgagtcaccgacgccgaggagaagcttcagcaggag
atcactgagctgaagaagagagaagctgaactgaagcagctctcactcacacacgaccac
aaccagtttctcctcaactaccgctcactgtcagcactctgtccgtccacacactcgtcc
accatcaacgtccgtcctctgagacactttgaggacgtgacagcggctgtggcaaagttc
agaggtcaactgcaggacgtcctgaccgagacgtggacaaacatctcactggctgtgact
cgagttgatgttttactgacagaaccagaactaaagaccagagctgaattcttcagatat
tcacaggaaatcacactggatccaaacacagcaaacacacgtctgttattatctgaggga
aacagaaaagtgacattaacttgtgaagatcagtcttgtcctcgtcacacagacagattc
actggttatcttcaggtcctgagtaaagagagtctgactgcacgttgttactgggaggtg
gagtggacgggaggaggtcgtgtagcagtgacgtacaagaacatcagcagatcaggttca
gatgaatgtgcatttggatacaatgataaatcttgggctttagatttttaccaaaactat
tttcagtttggtcacaacagaatctggactgaagtctcagatggtttgtcctccagagtg
ggagtttacctggaccacagagcaggtcttctgtccttctacagagtctctgacaccatg
tctctgctccacagagtccagaccacgttcactcagcctctctatgctggagtttatctt
tatccttcacctggagacacagctgagttctgtaaactcaaataa
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