Solea senegalensis (Senegalese sole): 122775073
Help
Entry
122775073 CDS
T07721
Symbol
virma
Name
(RefSeq) protein virilizer homolog isoform X1
KO
K22910
protein virilizer
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssen03019
]
122775073 (virma)
Messenger RNA biogenesis [BR:
ssen03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
122775073 (virma)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VIR_N
HU-CCDC81_bac_2
V-ATPase_H_N
BUD22
Motif
Other DBs
NCBI-GeneID:
122775073
NCBI-ProteinID:
XP_043890722
LinkDB
All DBs
Position
LG9:18860671..18877310
Genome browser
AA seq
1816 aa
AA seq
DB search
MAGDLSTELLFLDTFKHQSAELTNVDVVRFPCGVLITEVRVIPPGIKAHSNLPDSRAFGE
TSPHAFQLELFFNNLTKSNSPTFHRLGSLEYDENKSIVFRPNGKVNTDGLVLRGWYTSLT
VAVYGTAERSHGHGQDSPPPPPPPPPQQPSGPKRIVKQEWEKDDQYNGSPPRPAPRGPRT
PPGPPPPDDDDEEQVQVTVGVVKDEPGEGRDDYLEAVSPERSLPADEPYSDAEQEEEGDE
EEEEEQEEEEDARTEGSAPEEEEEEEEEEDEGEDEEEEMEEGDDGYEQISSDEDDLDNGS
FKLPTFDMDYTPEDLASVPPVQFDPYERELRPLLYFTPPYKTRFDIQLEKSSVEEPRDAG
DTKELPGGEEAEAVAQVKELLASVGEERDARWVTALEEVPGLLAKGLAYLIKQGEGEEED
LVRVLVKWTLQALSMEIALTQPIALNLRQLKAGAKLASYLADCPQGLTVLLCEGALGVLL
ELLHTNHVSSTLKLSILRALDALISTPAGVEAFLHTGESEKSGYQHLVQLFLREETVRVI
TAGNAIIQKSHMYEVLVDLQHTASAWSETQQEDIEDAENAMEEEPSLNSPPVSEAELDRL
TGVLEELHHLLETASHCMVQPPGKAFPTTARITGPQERDDPYPALYRYMHTCHFLESTTV
VLSAAAAAGHVGVTQAVRELLRFLSLTQPGLLFLVAQPAPTNLLLRLLASMAEAEGEESA
FTGGEGTLTGPGFGEEGFAVWLMQALHALQGVSELMSHVAAGGEGGAGLEEGDNAEVLGM
LHALYLMTFTQTGRSAVSHVFSLDNNLSCLVTLLQHHSKDGQSEAKARKAVTYNYACMLV
LLVVQSSLDLRMMEQFASPLLSLAKADETNAKLQELNKWLEPLEKLRFEIGSIPTLLDYI
KRNVENVLTADGTGLVTALRCLCHIGCPPPAVEGQQKDLKWSLAGVQLFSGEGLDTCVHV
LQKLCSILLQPWRVHGHMGPTPQRCMILSICISTLRLLRTMLTELLRGGAFQFRDTRVAS
VLVTLHMIVCSIPASGRLDGEETRVQAFIVDVLLTFTQGVSEQVTHTEETLASNTWSLML
KEVLNSLLKAPEGLFSGLTLLSELLPLPLPMQSTQVISVQDVAVALNTRKLWSMHIRAQW
KVFSEALKCVCATTCPPLLAMLRRVCVQLADLSSLTATLTMKTLVELLLEELQPVEGKNV
CWAQTLRLLSLMDTLVSQRACKSAALHLLSGSVSGDEQLAELFPLLLSLLIPPTDHCSQQ
QQCSELVGTIFQSLCDQDISLVVSPPSESCVSEAEQLANALPGRDMMSSVCNSLLEVLGN
DESSVPLLLTCIRTLTFLSEHDYGLYHVKFALKKHGTGLCALLKRLVLSFNKDSADLLSA
LLDFLRQILNTDAMSVEEGLRSGEESSFSTAPRLWLSGFEMKALLHWEESESHPLQTLEK
EITKLCKEDESLEAILENVIVLRQTLETATDTPPAAETEPTLPPAETLGAQFNHRTVFIL
SEALDEHLKALWFSPFQTDDIETDLDVVKVDLVGLAQECCPELDLKAELERSFLSEPSSP
GHTKATKGFRLGKHKHETFITSSGKSDYIEPAKRAHIMAAPRGRGGRGGFGQNLCRPHDI
FRQRKQNTSRPPSMHVDDFVAAEFKDITTPLGLLPPKRLPKSSPKPPTRGLFTGNRGRAT
FHSQTRFFTPPQPKGVLLSGNYARRDGGRGGSSWSGQVPAVTHRGTYSEPRGGQSNFTRG
PLPSRQPPASAYRLAPRDRAPRGRGGTGLSWPSGGAGGGGAGGGGGGGGRGSQGSKFSGG
GGSGGGRGRHVRSFTR
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggatctttcaacggagcttctttttctagatacgtttaaacaccagagtgca
gagctaaccaacgttgatgtggtgcggtttccttgtggggtgctgatcacagaagtgcgg
gtcatccctccaggaatcaaagctcacagcaacctaccagacagcagagcgtttggggag
acatctcctcacgccttccagttggagctgtttttcaataatctcaccaaatccaacagc
cccaccttccacagactgggcagtctagagtatgatgagaacaagtccatcgtattccga
cccaatggaaaggtgaacaccgacggccttgtgctgcgtggatggtacaccagtctgact
gtggcagtatatggtacagcagaacgctcacatggacatggccaagactcgccccctcct
ccaccacctccacccccccaacagccaagtgggcccaagaggattgttaaacaagagtgg
gaaaaagatgatcaatacaacgggagcccacctagaccagcacccagagggcctcgtact
ccacctggaccaccacctccagatgatgatgatgaggagcaggtccaagtgacagtgggt
gtggtcaaagacgagccgggcgagggccgtgatgactacctagaggccgtttcacctgag
agatcgctgcctgctgatgagccatactctgatgctgaacaagaggaagaaggcgatgag
gaggaagaggaggagcaggaggaggaggaagatgcaaggacagaggggagtgctcctgag
gaggaggaggaagaagaggaggaggaagatgagggtgaggacgaggaagaggagatggag
gaaggtgatgatggttatgagcagatttccagtgatgaagatgatctggataatggtagc
ttcaagttgcccacctttgacatggactacactcctgaggacctggcatcagtcccaccc
gtccagtttgacccctatgagcgagaactcagacccctgctctacttcacccctccgtac
aagactcgttttgatatccagcttgaaaagtccagtgtggaggagccaagggatgctggt
gatactaaagagctgccaggtggagaggaagctgaggctgttgcccaagtgaaagagctt
ctagcgagcgttggtgaggaacgagatgctcgctgggtcactgctctggaagaggtacct
ggacttctggccaaagggttggcgtatttaattaaacagggagagggtgaggaggaggat
ttggttagagtcttagtcaagtggactctccaagctctgagtatggagattgctctcaca
caacccattgctcttaacctcagacaattgaaagcaggtgccaagctagcatcatacctg
gcagattgtccacagggactcaccgtgctgctgtgtgaaggtgccctgggcgtgctactg
gagctgctccacaccaaccatgtgtcttccactctgaagctgagtatcctgagagctctg
gacgctttgattagcactcctgctggggtggaagcattcctacacacaggagagtcggag
aagagtggttatcagcatcttgtccagctattcctgcgtgaagaaacagtgagggtcata
actgctggcaacgccattatacagaaaagtcacatgtatgaggtactggttgacctacag
catacagcatcagcatggagtgaaacacagcaggaggacatagaagatgctgagaacgcc
atggaggaggaaccgtcactgaactcgcctcctgtgagcgaagcagagcttgataggttg
acaggagttttggaggagttacatcacctgctagagaccgcctctcactgtatggtgcag
ccacctggaaaagccttcccaaccactgcaagaataacaggaccacaagagagagatgat
ccatatccagcactgtatcggtacatgcatacttgccatttcttggagagcacaactgtg
gtgctgtctgcagctgcagcagctgggcacgtaggtgtcactcaggctgttcgagagctc
ctgcgcttcctgtcgctcactcagccaggtctgctctttctcgtcgcccagcctgctccc
accaacctgctgctgcgtcttctggcatcaatggcagaggccgagggggaggagagtgcg
tttacaggaggagagggaactctcactgggcccgggtttggtgaagagggctttgctgtg
tggcttatgcaggcgctgcatgctctgcaaggtgtgtctgagctgatgagccatgtagcg
gcaggaggagaggggggagctggactcgaggaaggtgacaatgcagaggtactgggcatg
ctccatgcgctttatctgatgaccttcactcagactggtcgcagtgctgtgtcccacgtt
tttagcctggacaacaacctctcgtgtctggttaccctgcttcagcaccacagcaaagat
gggcagagtgaagcaaaggctcgcaaagcagtgacgtataattatgcctgtatgctggtg
ttactggtggtgcagagctctcttgatctgcggatgatggagcagttcgcttctccactt
ctttccttagccaaggctgatgaaaccaatgccaaattacaggagctcaataaatggctg
gaacctctggagaaacttcgctttgagattggcagcattccgaccctccttgattacata
aagcggaatgtggaaaacgtgttgactgctgatggaactggactcgtaactgcactcagg
tgcctctgtcatattggctgcccccctcctgctgtggaaggtcagcagaaggatcttaag
tggagtcttgcaggggtccaactgttctcaggcgaaggtctggacacttgtgtgcatgtg
cttcaaaagctgtgcagcattttgctgcagccatggcgtgtacatggacacatgggcccc
acgccgcagagatgcatgatcctcagtatttgtatcagcactctcaggttgttgcggact
atgctgacagagctactccgtggaggcgcttttcagttcagggacactcgtgtggccagc
gtgctggtgactctccacatgattgtttgctccatccctgcatcaggtcgtctggacggg
gaggaaaccagagtgcaggcatttattgttgatgtgctgctcaccttcacacagggtgtc
agcgaacaggtgactcatacagaagagactctggccagtaacacttggtcactgatgctg
aaagaggtgttgaactcactgctcaaagcccctgaaggtttgttctctggcctgacactg
ctgtccgagctcctgcctcttccactgccaatgcaaagcactcaggtgatatcagtccaa
gatgtggctgtagcccttaacacaaggaagctgtggagcatgcacattcgggcacagtgg
aaagtgttttcagaagcactgaagtgtgtgtgtgcaaccacctgccctcctctcttagct
atgctcaggagagtgtgtgttcaactggcagacctgtcttcactcactgcaacactcact
atgaagaccctggtggaactgctgctggaggaactgcagccggtggaaggtaaaaatgtg
tgctgggcccagacactacgcctgctctctttgatggacaccctggtgtcacagagagct
tgtaagagcgcagcattgcacctgctctctgggtctgtgtctggagatgaacaactggct
gaactgttccccttgcttctgtccctgttgattcctccaactgaccactgctcacaacag
cagcaatgcagtgaactagtgggtacaatatttcagtcactgtgtgaccaggacatttct
ttagtggtttctccacctagtgaaagctgtgtgtctgaggctgaacagctggcaaatgca
cttccgggacgagacatgatgtcatcggtttgcaattctttgctggaggttttgggcaat
gatgagagcagcgtcccactcctcctcacctgcatcaggactttaacattcctctcagag
catgactatggactctaccatgtgaaatttgcactgaagaaacatggcacaggactgtgt
gctctgttaaagaggctggttttgtcattcaacaaggactcagcggatctactctctgct
ctgctcgacttcctcagacagattctcaacacagacgcaatgagtgttgaggagggtctg
agatctggtgaagagtcctccttctctactgctccacgtttgtggctgtcgggctttgag
atgaaagctctgctgcactgggaggagtctgagtcacatcctcttcaaactttggagaaa
gagatcacaaaactatgcaaggaagacgaatcactggaggccatattggaaaatgtgatt
gttcttaggcagacactggaaacggctactgacactccaccagcagctgagactgagccc
actctgccgccagctgagacactcggggctcagttcaaccacagaactgtgtttattctg
tcggaggctcttgatgagcacctgaaggctctgtggttttctccctttcaaactgatgac
atagaaacagaccttgatgtggtgaaggtggatctggtgggtttggctcaggagtgttgt
ccagaactggacctaaaggctgagctggagcgctccttcctgtccgaaccttcttctcct
ggacataccaaagctacaaaaggcttcagactgggcaaacacaagcatgagacattcatt
acatccagtggtaaatcggactacattgagcctgctaaaagagctcacattatggctgct
ccaagaggtcgaggaggccgcggaggctttgggcaaaatctctgccgtccccacgatatc
ttccgccagcgcaaacagaacacttctcgtcctcccagtatgcatgtggatgattttgtg
gcagcagagtttaaggacatcacgaccccacttgggcttttgcccccaaaacggttgcca
aagagttcacccaaacctcccaccagaggactgttcacaggcaacagaggcagagccacg
ttccacagccagactcgctttttcactccaccacaacctaaaggtgtattgctctctggt
aactacgctcgtcgagatggtggcagaggaggttcatcttggagcggccaagttccagct
gtcactcacagaggaacctacagtgaacccagaggaggccagagcaacttcacccgtgga
ccactgccttccaggcaacccccagcaagtgcatatcgtctggctcctagagaccgtgct
ccacggggcagaggaggcaccgggctgtcgtggcccagcggaggagccggaggtggcggt
gctggtggaggaggcggaggaggaggcagaggatctcaggggagcaagttcagtggagga
ggtgggagtggtggtgggaggggcagacatgttcgctcctttaccaggtaa
DBGET
integrated database retrieval system
