Solea senegalensis (Senegalese sole): 122775205
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Entry
122775205 CDS
T07721
Symbol
sim1a
Name
(RefSeq) single-minded homolog 1-A
KO
K09100
single-minded
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122775205 (sim1a)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122775205 (sim1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SIM_C
PAS_3
PAS_11
PAS
PAS_9
HLH
PAS_4
Per3-like_PAS-A
Motif
Other DBs
NCBI-GeneID:
122775205
NCBI-ProteinID:
XP_043890948
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Position
LG9:7735295..7757063
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AA seq
760 aa
AA seq
DB search
MKEKSKNAARTRREKENSEFYELAKLLPLPSAITSQLDKASIIRLTTSYLKMRIVFPEGL
GESWGHVSRNSSLNGISQELGSHLLQTLDGFIFVVAPDGKIMYISETASVHLGLSQVELT
GNSIYEYVHPADHDEMTAVLTAHQPYHSHFVQEYEIERSFFLRMKCVLAKRNAGLTCGGY
KVIHCSGYLKIRQYSLDMSPFDGCYQNVGLVAVGHSLPPSAVTEIKLHSNMFMFRASLDM
KLIFLDSRVAELTGYEPQDLIEKTLYHHVHSCDSFHLRCAHHLLLVKGQVTTKYYRFLAK
QGGWVWVQSYATIVHNSRSSRPHCIVSVNYVLTETEYKGLQLSLDQAVSKAQFPYSNSSS
AASSLVDSCRTPKSKVSRHKTKARLSPYTQYPSFQTERSESDQDSPWGSSPLTDSASPQL
LEQSEGLDASCVYKQFTDPRTLCYSPSEEQHHTHLHAHSQGQRCERGRCEAGRYFLGAPP
PGSNMLWGTTRSILPLSKSSLENHDGYNNSMQHITAVHSYNGQGHWDDDSVVSSPDAGSA
SDSGDRYRADHYHCSPQEPSKIETLIRATQQMIKEEESRLQLRKCPPDSPLGPANGLPKG
PGPCFTPEYTQGQLPLQSVVCRGLNQVVSPANSPAPLSRHSSPGSERLHKPKDYLQTDLP
PLSLPLHHPLGRPGPCSASPALTPSLYPSHNHPRPYLDKHTAFSLTGYALEHLYDPESLR
GYCTSNNTGPTHYDMTPHLRMPSEQPPGHKGTSVIITNSS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaagtctaaaaatgccgcgcggacgcggcgggaaaaggagaatagtgaattt
tatgaactggccaaactgttgccgctgccctccgccatcacctcccagctggacaaagcc
tccatcatccgcctcaccaccagctacctgaagatgaggatcgtcttccctgaaggcctc
ggggagtcctggggtcatgtgagtcgtaatagttctctgaatggaatcagccaggaatta
ggctcccatctcttacagacgttagacggcttcatttttgtcgtggctccggatgggaag
ataatgtacatatcagaaacggcgtccgtccacctcggcctgtcgcaggtagagttgaca
ggaaacagcatttacgagtacgtccacccagcagaccatgacgaaatgacggccgtcctc
acagcgcaccagccataccactcacactttgtccaagagtatgagatcgagcgctccttc
tttctcaggatgaaatgtgtcctcgctaagagaaacgcaggtcttacctgtggaggctac
aaggtgatccactgcagcggctacctgaagatccgacagtacagcctggacatgtctcca
tttgacggctgctatcagaacgttgggctggtggcggtcggtcactcgttgccgcccagc
gccgtcactgagatcaaactgcacagcaacatgttcatgttcagagcgagcctggacatg
aagctcatcttcctggactcgcgggttgcagagttgacaggctacgagcctcaggatcta
atagagaagacactctatcatcacgtccacagctgtgactccttccacctgcgctgtgct
catcatttgttgttggtgaaaggtcaggtcaccactaagtattaccgtttcctggccaag
caaggtggctgggtgtgggtccagagttatgcaaccattgtacacaacagccgctcatcc
cggcctcactgcatcgtcagtgtcaactacgttctcacggagacggagtacaaaggactc
cagctgtctctggaccaggccgtgtccaaggcccagttcccctacagcaacagcagcagc
gcggccagcagcctcgtggacagttgcaggacacccaagagcaaagtgtcccggcacaaa
accaaagctagattgtcaccgtacacacagtatcccagtttccagacagagaggtcagag
tctgaccaggacagtccgtggggcagcagccctctcaccgactcagcctcccctcagctg
ctggagcagagcgaaggtctggacgcctcctgtgtgtacaagcagttcactgatccccgc
acactctgctacagcccgtctgaagagcagcatcacacacacctccacgcacacagtcaa
ggtcagcgctgtgagcggggtcgatgcgaggcgggcagatattttctcggagcgcctccg
cctggcagcaacatgctgtggggcaccacccggtccatcctgccgctgagcaagagctct
ctggagaaccatgatggatacaacaacagcatgcagcacatcacagctgtccacagctac
aacggccagggccactgggatgacgacagtgtggtcagctctccagacgcaggctcagcc
agtgactccggggatcggtaccgagcagaccactaccactgcagcccacaggaacccagc
aagatcgagacgctgatccgagccacgcagcagatgatcaaggaagaggaaagtcgactt
cagctgcgcaaatgtcctccggattctccactgggaccagccaatggactgcccaagggc
cccggaccatgcttcactcctgagtacactcaggggcagctgccgcttcagtctgtggtg
tgtcgagggttgaatcaggtggtcagccccgcaaatagccccgcccccttatctcggcac
agcagtccgggatctgagcgcctccacaagcccaaagactacctccagacggacctgcca
cccctttctttgccactacatcacccactgggtcgcccaggtccgtgttcggcgtctccc
gccttgaccccgtccctgtacccctcccacaaccatccacggccatatttggacaagcat
acagccttctccctgacaggctacgccctggagcacctctatgaccctgagagccttcgg
ggctactgcacgtccaacaacactggccccactcactacgacatgaccccacacctccgc
atgccgtcagagcagccccccggacacaaaggcacctccgtcattatcaccaatagcagc
taa
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