Solea senegalensis (Senegalese sole): 122775655
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Entry
122775655 CDS
T07721
Name
(RefSeq) transcription factor SOX-6-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122775655
Transcription factors [BR:
ssen03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122775655
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122775655
NCBI-ProteinID:
XP_043891653
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Position
LG10:902650..941483
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AA seq
626 aa
AA seq
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MERLLSKEWKERVDCLNATELLAEVKGTPESLEEKEHQLSTMISQLINLREQLLAAHDEQ
KKMAASQLEKQRQQMELARQQQEQIARQQQQLVQQQQKINILQQQIQVQGHMPPLMIPLF
PHDQRSLAAAAAAQQGFLFPPGMSYKPAGDNYPMQFIPSSMAAAAASGLSPLQLQQLYAA
QLASMQISPGAKMTPLPQAPNSSGPLSPSALKNEKRACSPITHIKEEGSTQPLNLSARPK
TAEALRSPASPTQSLFSGSKTSPTGMGKGCIPSPTPHMGRNTSLDILSSLNSTAFGDQDA
VMKAIQEARSMREQIQREQLHQQQQQSGHQSLEAKLSALSSMTLNNGNKERLHYETLSQH
LGKLGEDAGKMVHRVIDLTRPEDLDGSNITEARVFREARGRNNNEPHIKRPMNAFMVWAK
DERRKILQTFPDMHNSNISKILGSRWKAMTNQEKQPYYEEQARLSKIHLEKYPNYKYKPR
PKRTCIIDGKKLRIGEYKQLMRSRRQEMRQFFVGPQPSIPLSNSPGGVYPGAINMATAAT
PSPHLTSDCSSNSVSPEPAIPVIQSTYGVKTEPGGGGSNGGGVRALDMPSDPTNGDDDMD
MYDDFEDEPKSDYSSDHETREAVSAN
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctgtccaaggaatggaaggagcgcgttgactgcttgaacgccactgaa
ctgctggcggaggtcaaaggtacaccagagtccctggaggagaaggagcaccaactttcc
accatgatcagccagctgatcaatctgagagagcagctccttgccgcccatgatgagcag
aaaaagatggccgcctcacagctggagaagcagagacaacagatggagctggccaggcag
cagcaggagcagattgccagacaacagcagcagctcgtgcagcagcagcaaaagataaac
attctccagcaacagatccaggtccagggtcacatgcctccgctgatgatcccactgttt
cctcatgaccagaggtccttggctgctgctgctgctgcacagcaaggtttcctcttccca
ccaggcatgtcctacaagccagcaggtgataattatcccatgcagttcattccatcttca
atggcagctgcagcagcatctggactcagcccattacaactacagcagctgtatgcagcc
cagctggcaagcatgcagatctcaccaggagccaagatgactcccctcccgcaagctccc
aactcctctggtcccctttccccctctgccttgaagaatgagaagcgggcttgcagtcct
atcactcatattaaggaggaaggatccacacagccactgaacctctccgccaggcctaag
acagctgaggctcttcgctccccagcatccccaacacagagtctgttctctgggagtaag
accagccctacaggcatgggcaagggctgcatccctagccctaccccccacatgggcagg
aacacctctcttgacatcctgtccagcctaaattccacagcgtttggggaccaggacgca
gtgatgaaggccatccaggaggccaggagcatgagggagcagatccagagggagcagctc
caccaacagcagcagcagtcaggacaccagagtctggaggccaagctgtctgccctcagc
agcatgaccctcaacaatggcaacaaggagaggttgcactatgagacactgagccagcac
ctggggaagcttggagaggatgctgggaaaatggtccaccgagtcattgacctgacaaga
ccagaagatctagatgggagtaacatcactgaggcacgcgtgttcagggaggcacgaggc
aggaacaacaacgagccccacatcaagaggcccatgaacgccttcatggtctgggctaaa
gacgagaggaggaagatcctgcagacgttcccggatatgcacaactccaacatcagcaag
atactcggctcccgttggaaagccatgaccaaccaggagaaacagccatactacgaggag
caggcgcgcttaagcaagatccacttggagaaataccccaactacaaatacaagccgcgg
cccaagagaacctgcatcattgatggcaaaaagctgcgcatcggcgagtacaaacagttg
atgcggtcacggcgtcaggagatgaggcaattttttgtggggccccagccatcaattcct
ctcagtaacagcccaggtggagtttacccaggtgccataaacatggcaacagcagccaca
ccatccccacacctgacctcggactgctccagcaactcggtcagccccgaaccagccatc
cctgtcattcagagcacgtatggggtaaagaccgagcccggcggtggcggcagcaacggc
ggtggagtccgagctttggatatgcccagcgatcccaccaatggagatgatgacatggac
atgtacgatgactttgaagatgagcccaagtcagactatagcagtgaccacgagacacgg
gaagccgtcagtgccaactga
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