Solea senegalensis (Senegalese sole): 122776607
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Entry
122776607 CDS
T07721
Symbol
agrn
Name
(RefSeq) agrin isoform X1
KO
K06254
agrin
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04512
ECM-receptor interaction
ssen04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122776607 (agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122776607 (agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ssen00535
]
122776607 (agrn)
Proteoglycans [BR:
ssen00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122776607 (agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
NtA
Laminin_EGF
SEA
CFAI_KAZAL
EGF
Laminin_G_3
hEGF
Motif
Other DBs
NCBI-GeneID:
122776607
NCBI-ProteinID:
XP_043893143
LinkDB
All DBs
Position
LG11:18374091..18600332
Genome browser
AA seq
2105 aa
AA seq
DB search
MGSHRTVRAGRTALLLLAGLLVALLQRCSASCPERELEDREEEANIVLTGTVDEIINMDP
VHNTYSCKVRVWRYLKGKTNVNREILLDGGNKLMIGGFGNPSICDNQVATGDTRIFFLNT
APESMGPEHKNELMLNSSLMRITLRNLEDVEHCVEDKPPHFTPAQPPDACRGMLCGFGAV
CESDPTSRAKAECVCRKMDCPSLVAPVCGSDSSTYSNECELEKAQCHTQRRIKVLRKGPC
SLKDPCTDVICSYGSTCVQSSDGLSAKCMCPLGCDGKPEETVCGTDGKDYYNECELHQHA
CKNQKNIRVQYQGHCDPCKGSENSLNTMCRVKSLTRQPLLLALPESCPPESEPLCASDGQ
TYASECAMIARGLQKDTQLRKVHKGRCRRLEECKEECLFNAVCLVEQLSARCSCDPIHCD
GTYKPICGKDSHTYTNDCMRRKAECVRRSLIPIRHTGPCDLNVPSPCLDKVCEHGAMCVV
KNNEPVCECPEACPQTHDPVCGIDGHSYGSPCEMRAMGCALQKDIRMQHKGPCNASCANC
SFGAICDFQSGQCVCSSECVESHQPVCGSDGITYNSECELHVRACKEQMDLQVVSQGECK
TCGSTVCAWGARCVQTKCECPQCLGEAFSPVCGTDGTTYDNKCELQLSSCMQKKRVDVAK
PGSCDEDCGSGGSGSGVESCEQDRCRVFGGSWDEDAEEDRCVCDFTCQSVPDKLVCGSDG
RNYSNECELKKARCEKQEHLLIQNQGPCAVIAGTSLPELTVPQHCSLSVYGCCSDNMTAA
LGVGLAGCPSTCQCNVYGSYKGTCDPATGQCSCKPGVGGQKCDRCEPGFWNFRGIVTENM
SGCTPCNCDATGSVRDDCEQMSGLCSCKTGVKGMKCNVCPDGSKMGMNGCDKGPEAPTSC
EELACSFGASCIEVNGQAHCECPSPDCDERNKTKVCGSDGVTYADQCQLRTIACRQDKDI
TVQHFGQCTETISELAERPTLNPLTTIPSSAAAASITTTAPFHPNMVWAIPPPRTEINER
PTATTPLSTPTHNRVRTTHHAPIHIQPPQSTAATTASLRSSPAPSAAVISFEGSGSGDPS
GDDQPEEEDEQEEEAGSGIPTEASGAEEPVGPTVSSTTVPKAEDRSSCDNTDFGCCPDGK
TPSSTPEGTNCPSTMRFNGFLHLDRVEGQEIFYTPEMDDPKSELFGETARSIESALNELF
RKSEVHKDFMTVRVRNLAPSRSILAFVETHFRPDTRYTVEDIEGALLKQLKASRESSIAV
KKPEDENIHFTNYGLSSVPFFTITTTTTTAVVTTAAPTTTTTTTTTTRLPPTSPYFTRRP
PGTTRRPFNTRRTTTTSAPVTTPLPTTVAVTTTALPPVTTIAHFRGKFHHKAPKPCDSHP
CLHGGTCEDDGNDFICKCPAGRGGSVCEKVIKYFIPSFGGQSYLAFQTMSAYHTVRIAME
FRASEATGILLYNGQGGKKDFISLALVNGRVELKFNTGSGTGTVVSKVQISQGRWHQLVV
TRNRRNAMLSVDNEPHIEGQSPHGTEGLNLDTHLFIGGVPGEMKQDVRERTAVATGLVGC
IRLLDVNNRVLNLQENGDHSLYGSGVGECGNNPCLPNPCKNGAACQVKEAEMFHCKCSKG
FWGPTCADVQDPCEPNRCHPSSQCQALPEGGYKCECPMGREGRHCEKVAERRGAYMPQFN
GDSYLELKGLHLYGHDLRQKVSMTVVLMANDSNGVIFYNGQKSDGKGDFISLSLNNGILE
FRYDLGKGPAIIRSKEAIRLNVWNTINLERSNRKGEIMVNKKDPVRGEAPKSRKNLHVDL
NLKESLFVGGAPDYSRLARAAALTDGFKGTIQKIILMGTPILREENALHASNIAMFQDHP
CSQEPCHNGGLCSPQLDTYECVCLNGFSGGHCQNTIYEKSAGETEAIAFDGRTFIEYHNA
VTKSQLTNEIPDPESLENPSDQSEKALLVNKFELSIRTEATQGLVLWSGKGVERSDYIAL
AIVDGHIQMTYDLGSKPVVLRSSVRVDTNRWIRIKASRALRDGSLQVGNEAAVTGSSPLA
ATQLDTDGALWLGGLEELAVARRLPKAYSTGFVGCIKDVVVDGVELHLVEDALNSPQILH
CSAAK
NT seq
6318 nt
NT seq
+upstream
nt +downstream
nt
atgggttcccatcggacagtccgggccggccggacagcgctgctcctgctggcggggctg
ctcgtggctctgctgcagcgctgctccgctagttgcccggagagagagttggaggacaga
gaggaggaggctaacatcgtcctgaccggcaccgtggacgaaatcatcaacatggacccg
gtgcacaatacctactcctgcaaggtaagggtgtggcgctacttgaaaggcaagaccaat
gttaatcgtgaaatcctcctggacggtggaaacaagttgatgatcggcggctttggcaac
ccgagtatctgcgacaaccaggtggccacaggtgacactcgcatattctttctcaacact
gccccggagtccatgggaccagaacacaagaacgaacttatgctcaactcaagcctgatg
aggattaccctgcgcaacctggaggacgtggagcactgtgtagaagacaaacctcctcac
ttcacaccagcccagcctcctgatgcctgtcgaggaatgctgtgtggttttggcgctgta
tgtgagagtgatccaaccagccgggccaaggctgagtgtgtttgcaggaaaatggattgt
ccatccttggtggcacctgtttgtggctcagattcatccacttactccaacgagtgtgaa
ctggagaaagctcagtgccacacacagcgacgcatcaaggtgctgcgcaagggaccctgc
tctctgaaagatccgtgcaccgacgtgatctgtagctatggcagcacctgcgtccagtcg
tcagacggcctgtcggctaaatgcatgtgtcctcttggctgtgacggcaagcctgaggag
acagtgtgtggcactgatgggaaagactactacaacgagtgtgagctccatcagcacgcc
tgcaagaaccagaagaacatacgtgtgcaataccaagggcactgtgacccatgtaaaggc
agcgagaacagtctgaacaccatgtgccgagtgaagtctctcacccgccagcctctgttg
cttgcccttccggagtcgtgccccccagaaagtgagcctctgtgtgccagtgacggtcaa
acctacgccagcgagtgtgccatgatagcaaggggcttacagaaagacacccagctcagg
aaggtccacaaaggacggtgcagaaggctggaggagtgtaaggaggagtgtctcttcaac
gcagtgtgtctggtggagcagctgagcgcccgctgctcctgcgatcccatacattgtgac
ggcacctacaaacccatatgcggcaaggacagccacacctacaccaacgactgcatgcgg
cgcaaggccgagtgtgtgaggaggagtctcatccccatcaggcacacagggccctgtgat
ctcaatgtaccgagcccatgcttggacaaggtgtgcgaacacggggcgatgtgcgtggtc
aagaacaatgagccagtgtgcgagtgcccagaagcttgcccgcaaacacacgacccggtg
tgcggaatcgatggccatagctacggcagcccatgtgagatgcgagcgatgggctgtgcc
cttcagaaggacatccgcatgcagcacaaaggaccctgcaatgcttcttgtgccaactgc
tcttttggggcaatttgcgatttccagagtgggcagtgtgtgtgttcatcagagtgtgtg
gagtcccatcagcccgtgtgtggcagtgacggcatcacctacaacagcgagtgtgagctg
cacgtgcgggcgtgcaaagaacagatggacctgcaagtggtcagccaaggagagtgcaaa
acatgtggcagcactgtttgtgcctggggtgcccgctgtgttcagactaagtgtgagtgc
ccacagtgcttaggtgaggccttctcacctgtgtgcggcactgatggcaccacctacgac
aacaagtgtgaactccagttgtcgtcctgcatgcagaagaagagagttgatgtggcaaag
cctggcagctgtgacgaagactgcggctcaggaggttcaggctcaggcgtggagagctgt
gagcaggatcgctgtcgcgtgtttggaggctcatgggatgaggatgcagaggaggaccgt
tgcgtctgtgactttacttgccaaagtgtgcctgacaagctggtgtgtggctcagatggg
aggaactacagcaacgagtgtgagctgaagaaggccagatgtgagaaacaagagcacttg
ttgattcagaatcagggaccatgtgcagtgattgccggcacttctctgcctgagctgaca
gtgccccagcactgcagtctgtctgtgtacggctgttgctccgacaacatgacggctgcc
ttaggagtgggtctggctggatgtcccagtacctgtcagtgtaacgtctatggttcctac
aagggaacttgtgacccagccactggtcagtgctcctgtaagccaggtgttgggggacag
aagtgtgaccgctgtgagccaggcttctggaacttcagaggcatcgtgacggagaacatg
agcggctgcactccatgtaactgtgacgccacaggctcagtccgggacgactgtgagcag
atgtcgggtctgtgttcctgcaagacgggagtgaaaggcatgaagtgcaacgtatgtcca
gatggaagcaagatgggcatgaacggctgcgacaaaggtcctgaggctccgacgtcatgt
gaagagttagcgtgcagttttggtgcttcttgcattgaggttaacggccaagctcattgc
gagtgcccctcacctgactgtgatgagagaaacaaaacaaaggtgtgtggctcagatggg
gtgacctacgccgaccagtgccagctgaggaccatagcctgcaggcaagacaaggacatc
acagtgcaacattttggacagtgcacagaaaccatctctgaactggcagagcgacccacc
ctcaatcccctcaccaccatccccagctcagccgctgccgcttccatcaccaccacagca
ccctttcaccctaacatggtgtgggccatcccgcctccaaggacagagatcaacgagcgg
cccacggccaccacccccttatccactcccacccacaaccgtgtgcgaacaacccaccac
gccccaatccacatccagccgccgcagtcaactgctgccaccactgcctccttgcgcagt
agccccgccccctccgctgcagtgatctctttcgaaggctcaggcagtggggacccaagt
ggagatgaccaacctgaagaagaggatgagcaggaagaggaagcgggtagcggcattcca
acagaggccagtggggcagaggaacctgtcggtcctacagtgtcaagcactactgtcccc
aaagctgaagacaggtcatcctgtgacaacacggactttggctgctgtcctgatggcaag
acaccatccagcactccagagggcaccaactgcccctccaccatgaggttcaacggtttc
ctacacttggaccgtgtggagggccaggagattttctacaccccggagatggatgacccc
aagtcagagctgtttggagagacagcccgcagcatagagagtgctctcaatgagttgttc
aggaaatcagaggtgcacaaagactttatgactgtccgtgtccgtaacctggcacccagc
agatccatcctggcctttgtggagactcacttcagaccggatacaagatacacagtggag
gacatcgaaggagccttgctgaaacagctgaaggcctccagagagagcagcatcgccgta
aagaagccggaggatgagaatattcacttcaccaattatggcctctcctccgtccccttc
ttcaccatcactaccaccaccaccacagcagtcgtcaccacagctgctcccactaccacc
accaccaccacaacaaccaccaggctgccaccaacctccccttacttcacccgccgcccg
cctggcaccacccgcaggcccttcaataccagacgcaccaccacaacctcagcgcccgtc
accacaccactccccaccacggtggctgtaaccacaacggcgctgcctccagtcaccacc
atcgcccacttcaggggcaagtttcatcacaaagcgccaaagccatgcgactcccacccc
tgcctgcacgggggcacctgtgaggatgacggcaatgacttcatctgcaagtgtcctgcc
gggcgaggaggctcagtgtgtgagaaggtaatcaagtacttcatcccgtcattcggcgga
cagtcgtacttggccttccagaccatgagtgcctaccacacagtgcgcatcgccatggag
ttcagagcatcagaggcgactggcatcctgctctacaatggccagggcggcaagaaggac
ttcatctctctggctctggtcaatggcagagtggagctcaagttcaacacaggttctggc
acaggaactgtggtcagcaaagtacaaatcagtcagggccgctggcaccagctggtggta
actcgcaatcgcagaaacgccatgctcagcgttgacaacgagccacacatcgagggccag
agcccacatggcacagagggccttaacctggacacccacctattcattggaggagtgccc
ggggaaatgaagcaggatgtaagagaaaggacagcggtggccacaggtttggtgggctgc
atccgattgctggatgtcaacaaccgagtgctcaacttgcaagagaatggtgatcacagt
ctgtacggcagtggtgtgggcgaatgtggcaacaacccctgtctgccaaatccctgtaag
aacggtgctgcatgccaggtgaaggaggctgagatgttccactgcaagtgcagcaaagga
ttctggggtccaacttgtgctgatgtccaagacccatgcgagccaaaccggtgccatcca
tcctcccagtgccaggcgctgccagagggaggctataaatgcgagtgtcccatggggcgt
gaaggaaggcactgtgaaaaagtggctgagagaagaggagcttacatgccacagttcaat
ggagactcatacctggagctaaaagggctccatctctacgggcatgatctgcgtcaaaag
gtcagcatgacagtggttctaatggccaatgactccaatggtgtgatcttctacaacggc
caaaaatcggatggaaaaggagatttcatctctctgtctctcaacaatgggatcctggag
ttccgctatgacctgggcaagggccccgctatcatcaggagtaaagaagcaattagactg
aatgtgtggaacaccatcaacctggagcgctccaaccgcaaaggagagatcatggtgaac
aagaaggaccctgtccgaggagaggcaccgaaatcacgtaagaacctgcatgtagatctt
aacctgaaagagtcactattcgttggtggagcacctgattacagccgactggcacgggcc
gctgctctcacggatggattcaagggaacaatccaaaagatcatacttatgggaacgccc
attctcagagaggagaacgccctgcacgccagcaacatagccatgttccaggaccaccca
tgctctcaggagccctgccacaacggtgggctctgcagtccccagctggacacctatgag
tgtgtttgtctcaatggattctcagggggacactgtcagaacaccatctacgagaagtct
gccggagagacggaggccatcgcctttgacggacggacattcatagagtatcacaatgct
gttacaaagagccaactgaccaatgagatcccagatcccgagtctctggagaacccatct
gaccagagtgagaaagctctgctggttaacaagtttgagctgagcatccggacagaggca
acccagggcctggtgctgtggagcgggaagggtgtggagcggtcagactacatcgccctg
gccatcgtggacggacacatccagatgacatatgacttgggctccaagcctgtggtgctg
cgctcctcggtgcgcgtcgacaccaatcgctggattcgcatcaaggccagcagagcactc
agagacggctctctacaggtcggcaatgaggcagcagtaacagggtcatcgcctttggca
gcaacacagctggacacggatggagcactgtggttgggtggtctggaggagctagcagtg
gcccgtcggttgcctaaggcctacagcaccggctttgttggctgcatcaaagacgtggtg
gtggacggcgtggagctccacctggtggaggacgccttaaacagcccccaaatactacac
tgttctgccgccaaataa
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integrated database retrieval system
