Solea senegalensis (Senegalese sole): 122780419
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Entry
122780419 CDS
T07721
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03460
Fanconi anemia pathway
ssen04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122780419 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122780419 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssen03000
]
122780419 (her6)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122780419 (her6)
Transcription factors [BR:
ssen03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
122780419 (her6)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
122780419 (her6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Motif
Other DBs
NCBI-GeneID:
122780419
NCBI-ProteinID:
XP_043899275
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All DBs
Position
LG14:9942320..9944085
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AA seq
277 aa
AA seq
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MPADIMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQLPSTAGPAHPSFGQSV
VQIPNSSPQVLPMNAVSCKGGSSPASLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNAGTPVPVPAAVSPGAPSGNTDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatattatggaaaagacctcgtcctccccggtcgctgcaaccccggcaagc
atgaacacaacccccgataaacccaagacagcctcggagcacagaaagtcatccaagcct
attatggaaaaaaggagaagagccagaatcaacgagagtctgggtcagctcaagacactc
atcctggatgcgctgaaaaaagatagctccagacactccaaactagagaaggcagacatc
ctggagatgacggtgaagcatctgcggaaccttcagagagctcagatgaccgctgctctg
aacacagatcccacagtcttgggaaaatatcgtgccggtttcagcgagtgcatgaacgaa
gtcacacggttcttatccacctgcgaaggcgtcaacactgaggtcaggacgcggttgctc
ggtcacctggccaactgcatgacccagatcaacgccatgaactatcccagtcagcatcag
caccagcaccagctgccctccaccgcggggcccgcacacccgtccttcggccagtcagtg
gttcagatccccaactcgtccccgcaggtcctgccaatgaacgcggtgtcctgtaaagga
ggctcgtcgcctgcgagtttaccctcagacgccaccaaagtgtacggtggcttccagatc
gtgcctgccacagacggacagttcgctttcctcatacccaatgcggcgttcgcgccaaat
ggccccgtaatccccgtgtacgccaacaacgccggcacgccggtgccagtgccggctgcg
gtgtctcccggagccccgtcaggcaacacagactcagtgtggagaccgtggtga
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