Solea senegalensis (Senegalese sole): 122780528
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Entry
122780528 CDS
T07721
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssen01002
]
122780528 (usp13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssen04121
]
122780528 (usp13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ssen04147
]
122780528 (usp13)
Enzymes [BR:
ssen01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122780528 (usp13)
Peptidases and inhibitors [BR:
ssen01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122780528 (usp13)
Ubiquitin system [BR:
ssen04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122780528 (usp13)
Exosome [BR:
ssen04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122780528 (usp13)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
122780528
NCBI-ProteinID:
XP_043899467
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Position
LG14:13195891..13235701
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AA seq
863 aa
AA seq
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MAADLGELLVPYMPTIRVPKTGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKSTGAAGGAIPRRRNGKVFIDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNSPSAYKKQEPESWEEEIQVSRHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETNYPLAVK
LDTITPDGADVYSFEEEEAVLDPHISEHLSHFGIDMLQMQKRTENGNHTDNNARPRVSEW
EVIQESGMKLKALYGPGYTGIKNLGNTCYLCTVIQVLFSIPDFQRMYVGNLQRIYDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEHKVLNWYQQKGISPRMFKAMV
SRGHPEFSSNRQQDAQEFLLHLINLVERNSAGSENPSDVFRFLVEERVQCCQSRRVRYTQ
RVDYCIQLPAPIEAATNREELLAYEAKWKDAEENMRAPPEPVRARIPFTSCLQAFTEPEN
VPDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKLDLAIDVPDFLDLNR
LRATGLQTGEEELPDLMPPIVLPEDTRDNSTGSGDSPEIDEVAVMQLAEMGFPLEACRKA
VYYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPSTSDSPMGATPLSNSPPEESI
AILTSMGFPRTHSIQALKATNNNLERALDWIFTHPEEEESDVLSDMADTEPNDNAFFNAN
SHSDSTLSPDRETLGPRVKDGPGRYELFAFISHMGASTMSGHYVCHIKKEGRWVIYNDQK
VCLSERPPKDLGYIYFYHRLSSS
NT seq
2592 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagacctgggagagctgctggtcccgtacatgcccaccattagagtccccaag
acgggagacagggttttcaaaagcgagtgtgccttctccttcgactctcctgagtctgag
ggaggcctgtatgtgtgtatgaacacattcctgggctttggacgagaacatgtggagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacggcatgtgaaagagaaa
tccacaggagctgcaggaggtgccatcccccgacggagaaacgggaaagtgtttatagat
ttagaactaaaccgtgattttaacggggaggactatgaatacgaggatgaggccaagctc
gtcatttttccagaccacttcgagattcccttaccaaatattgaggagttgccggctctg
gtcactattgcctgtgatgcagtgctcaattcaccatcagcttacaaaaagcaagagcct
gaatcatgggaggaggagatccaggtgtccagacatgccaggagcctccgacagcttgat
aatggggtcagaatcccacccagtggctggaagtgtcagaagtgtgagatgagagaaaac
ctgtggcttaacctgacagatggagcagtgctctgtgggaagtggttctttgatgggagt
ggaggtaatggccatgctttggagcactacagagagaccaactatcccctggctgttaaa
ctggacaccatcaccccagatggagcagatgtctattcatttgaggaggaagaagctgtg
ttggacccccacatatcagaacacttatcacactttggaatagacatgctacagatgcag
aaaagaacagaaaatgggaaccacactgacaataatgcacggccacgagtcagtgaatgg
gaggtgattcaggagtcgggcatgaagctgaaggcactgtatggtcctggatacacaggc
atcaaaaacctgggcaatacctgctacctctgcacagtaatacaggtcctctttagtatc
ccagattttcagaggatgtatgtgggtaatcttcagaggatatatgactattcacccctt
gaccccacccaggactttgccacgcaaatggccaaactgggacatggactgctctcaggc
cagtactcaaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaacac
aaggtattaaactggtaccagcagaaaggcatctccccaaggatgtttaaggccatggtc
agcaggggacacccagagttttcctcaaacagacagcaagatgcccaagagtttttgctg
caccttatcaacctagtggagaggaacagtgcaggctcagagaatccaagtgacgtcttc
cgtttcctggtggaggagcgagttcagtgctgtcaatcacgtcgggtgcgatacacacag
agggtggactactgcatccagttgccagcccccatcgaggctgccaccaatcgagaggag
ctgctggcatatgaggccaagtggaaagatgctgaggagaacatgagggctcctcctgag
ccagtcagagcacggattcctttcacgtcctgcctgcaggccttcacagaaccagaaaac
gtcccagacttctggagctcagcactacaggcaaaatcagctggagtcaaaacttcccgt
tttgcctccttcccagagtatttggttgtgcagatcaagaaatttacatttgggcttgac
tgggtgccaaagaaactagacctggccatcgatgtcccagactttctggatctgaaccgg
ctgcgggccacagggctgcagactggtgaagaggagctgcctgacctcatgcctccaatc
gtgctacctgaagatacaagagataactcaacaggctctggagattctccagaaatagac
gaggtggcagtaatgcagctggcagagatgggcttcccgctagaggcctgtaggaaggcg
gtctactacacgggcaacatgggccccgagatggccttcaactggatcatagctcacatg
gaggagcctgactttgcagaacctcttactctgccctccatgatggatcctggtccctcc
accagtgacagccccatgggtgccacgcctctgagcaactcgccccctgaggagagcatc
gccatcctcacttctatgggcttccctcgcactcacagcatccaggcactaaaagccacg
aacaataaccttgaacgagcacttgactggatcttcacccacccggaagaggaggagagt
gatgtcctttcagacatggctgacacagaacccaatgacaatgctttcttcaatgccaac
tcacacagcgactctacactttctccagacagagaaacattggggccgagagtcaaagat
ggaccaggacgctatgagctttttgccttcattagccacatgggagcgtccacaatgtct
ggacattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaatgaccagaaa
gtgtgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcgactg
tcgagcagttaa
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