Solea senegalensis (Senegalese sole): 122785803
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Entry
122785803 CDS
T07721
Symbol
dhx58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122785803 (dhx58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ssen04054
]
122785803 (dhx58)
Enzymes [BR:
ssen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
122785803 (dhx58)
Pattern recognition receptors [BR:
ssen04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
122785803 (dhx58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
AAA_22
PhoH
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
122785803
NCBI-ProteinID:
XP_043907698
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All DBs
Position
LG19:6232197..6235848
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AA seq
681 aa
AA seq
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MADFGLYNYQEEVVERALQGENIIIWLPTGGGKTRAAVYVAKKHLENTPQAKVVVLANKV
HLVEQHYTKEFKPHLGHDYTLVPVSGESEVKDFFGKVVQESDVVICTAQILYNAMISAEE
HKHIELSDITLLIVDECHHTHKESVYNTIMRCYVEKKLNGEGPLPQILGLTASPGTGGAK
SLAKAVDHVLQICANLDSAIVSTKNCVPELKKKVPRPVKTFDIVENRPEDPFGDRLKGMM
QMVHEYMNLAPDVALRELGTQEYEADVVVLEQRGVREDNRLLAQCALHLRQYNDALLIND
TLRMVDAYESLEQFYIMKSTKVIDGTDDFLVQLFFENQVHLRKLAKDPRYENPKMAKLES
VLLKQFRPGVQSRGILFSKTRKSIHCLNDWVLTNRGLQEAGVKADILTGAGNGSTYMTQR
EQLATIKQFRQGSLNLLISTTVGEEGIDIPECNLVVRYGLLTNEIAQQQARGRARAVDSQ
YSVVALKGGREERREITNELLEELTAEAIAQVQDMSIQGFRRKIAEIQEEAVLKRRMAER
CKIIKKSRHTAASVQLLCRNCFKSVASGSDIQLIDNAHYVNVNPDFEKHYKVGGQVRLAK
KFQDWEPGRLISCNNGNCNKDWGFEIKYKEVALLPNLAINNFALETPDGRMTAKKWKNVQ
FTVEDFSFQQYCQKNFPDLID
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttggactttacaattatcaggaggaagtggttgagagggctcttcaggga
gaaaacatcatcatctggctgccgacaggaggtggaaagacacgagctgctgtgtatgtg
gccaagaaacacctggaaaacacaccgcaggctaaagtggtcgtcctggcaaataaggtt
cacctcgtagaacagcattacaccaaagagttcaagcctcacctgggccatgactacacc
ctggttcccgtcagtggagagagcgaggtgaaggatttctttggcaaagtggtgcaggaa
tcggatgtggtcatctgcacagcacagatattatataacgctatgattagcgcggaggag
cacaaacacattgagctctcggatattactctactgatagtggatgaatgtcaccacacc
cacaaggagtccgtctacaatacgatcatgagatgctacgtggagaagaagttgaatgga
gagggtccactgccacagatcctgggtctcactgcatcaccagggacaggaggcgcaaag
tccctggcgaaggctgttgatcacgtcctgcagatttgtgccaacttggattcagccata
gtttcaactaaaaactgtgtccctgagctaaagaagaaggtaccccgacccgtcaagacg
tttgacatagtagagaacaggcctgaggatccatttggggatcgtctgaaagggatgatg
cagatggtccatgagtacatgaacttagctccggacgtcgcgctgagagagttgggcaca
caagagtacgaggcagatgtggtggttttagagcagcgcggggtacgagaggacaacagg
ctgctcgcacaatgtgcgctccacctccgacagtacaatgacgcgctgcttattaacgac
acgctgcggatggtggatgcttacgaatccttagagcaattctacatcatgaagtcgacc
aaagtcatcgatggaacggacgacttcctggtgcagcttttttttgagaaccaggtgcac
ttgaggaaactggccaaggatcctcgctatgagaacccaaagatggccaaactcgagagt
gttctgctcaaacagtttcgtccgggggtgcagtcgagggggatcctcttcagtaaaaca
cgtaaaagcatccactgcctcaatgactgggtgctcaccaatagaggcttacaggaagct
ggcgtcaaggcagacattctgacgggggcaggcaatggcagcacttacatgacacagcgc
gagcagttggccacgatcaaacaattccgccaggggtctctcaacctgctgatctccacc
acggtgggagaggaaggcattgacattcctgaatgcaatctggtggtgcgctatggcctg
cttacaaacgagattgcccagcagcaggccagaggacgagccagagccgtagacagccag
tattcagtggtcgccttgaaaggtggaagggaagaacgcagggagatcaccaatgagctg
ctggaagaactgactgcagaagcaatcgctcaggtccaagatatgagcatccaagggttt
cgcagaaagatagctgaaatacaggaagaggcagttcttaagagaagaatggcagagcgc
tgtaaaataattaagaagagtcgccacactgctgcaagtgtccagctcctgtgtcgaaac
tgcttcaagtcggtggccagcggcagtgacattcaactcatcgacaacgcgcactatgtt
aatgtcaatcctgactttgagaaacactacaaagtcggtgggcaggtacgcttagcaaag
aagtttcaggactgggagcccggacggttaatcagttgcaataacggcaactgcaacaag
gattggggatttgagattaagtacaaggaggtcgcactcctgcccaatctagccattaac
aactttgccctggagactcctgatggcaggatgaccgccaagaagtggaagaatgtccaa
tttactgttgaggacttcagctttcaacaatactgccaaaagaacttccctgacctcatt
gactga
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