Solea senegalensis (Senegalese sole): 122786043
Help
Entry
122786043 CDS
T07721
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
ssen
Solea senegalensis (Senegalese sole)
Pathway
ssen03022
Basal transcription factors
ssen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssen00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122786043 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
122786043 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssen03021
]
122786043 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
ssen03400
]
122786043 (gtf2h4)
Transcription machinery [BR:
ssen03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
122786043 (gtf2h4)
DNA repair and recombination proteins [BR:
ssen03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
122786043 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
122786043
NCBI-ProteinID:
XP_043907988
LinkDB
All DBs
Position
LG20:16715121..16721702
Genome browser
AA seq
465 aa
AA seq
DB search
MMKLRVQLQCQNLHKYLKELSPDILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPL
PQAAVALWVKKDSQKNHDECVSVLTGLSLWHSQQLQGGLQGYILNPVFKANLRIALLGGG
KAWADEGSSLGPDRHARDIDSLDRYAMERWEVILHFMVGSPNAAVSQDLSQLLVQAGLMK
REAGEAPYITSAGFQFLLLDTASQLWYITLQYLKTAQTRGMDLVEILSFLFQLSFSTLGR
DYSVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAISLAAGVTTSSTSSTSSLSS
TPGTGETGYIVVETNYRIYAYTTSELQIALVALFSEMLYRFSNVVVAQVTRESVQQAIAN
GITAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLQFSEGVLYNQFLSQAD
FEVLRDRAQGLGCLVWQDVAQRVLVVTPQGHSEVKRFWKRQKTHP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagctacgcgttcagctgcagtgtcagaatctgcacaagtatctgaaagagctc
agcccggacattttggacagactttacaatcatccagcaacatgtctggctgtttacagg
gaactcccttctctggccaaaaactatgtgatgcgtatgctgttcctggatcagcccctg
ccacaggccgcagtggcactgtgggtgaaaaaagacagtcagaagaaccatgatgaatgt
gtctcagtgttgactggactcagcctctggcacagtcagcagctgcagggcggtctgcag
ggatacattttaaatccagtgttcaaagcaaacctgaggattgctctgcttggcgggggc
aaagcgtgggccgatgagggcagctctctgggtcctgaccgccacgcgcgggacatagac
agtctggaccgctacgccatggagcgctgggaggtgattctgcatttcatggtgggctcg
cccaatgccgccgtcagtcaggacctgtcgcagctgctggttcaagcgggcctcatgaaa
agagaggcaggagaggccccctacatcacctcagctggtttccagttcctcctgctggac
acggcttctcagctgtggtacatcacgctgcagtacctcaaaactgcacagaccagaggc
atggacctggtggagatcttgtccttcttgttccaactcagtttctcgactctgggcaga
gattactcagtggagggcatgagtgagtcgctgctcaccttcctgcagcacctgcgggag
tttggcctcgtcttccagaggaagagaaaatcgaggcggtactaccccaccagactggcc
atctccctggctgcaggtgtcacgaccagctccacctcctccacctcgtccttgtcttcc
actcctggtactggagaaacgggctacattgtggtagaaacaaattatcgtatctacgcc
tacacgacctcagaacttcagattgctctggtcgctctcttcagtgaaatgctgtatcgc
ttctccaacgtcgtggtggctcaggtgacgagggagtcggtacagcaggccatcgccaac
ggcatcacagcacagcagatcatccactttctaaggaccagagctcatcctgtcatgctc
aaacagaccccagtgctgccgccaaccatcacagatcagatccgtctgtgggagctggag
agagatcgactgcagttcagtgagggagtgctctataaccagttcctctctcaggctgac
tttgaggtgctgcgagaccgagctcagggtctgggctgtctggtgtggcaggacgtggct
cagagggtgctggtggtgactccgcagggacacagcgaggtcaagagattctggaaacga
cagaagactcacccataa
DBGET
integrated database retrieval system
