Streptomyces alfalfae: A7J05_03365
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Entry
A7J05_03365 CDS
T05110
Symbol
ligB
Name
(GenBank) ATP-dependent DNA ligase
Organism
ssia
Streptomyces alfalfae
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
PNKP_ligase
HTH_15
Motif
Other DBs
NCBI-ProteinID:
APY84916
UniProt:
A0A1P8TBB3
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Position
894836..896374
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AA seq
512 aa
AA seq
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MLLARLAHVSKEVAATSARSRKIALLAELFRAAEPEDVPVVIPYLAGRLPQGRLGIGWST
LKEAGPPAGEATLTVAGVDAALTAIGAVSGAGSQAERRRLVGELLGAATADEQKLLTGLL
TGELRQGALDAVAVEGLAVATGTPADAVRRSVMFAGGVAPVAEALLARGAEALEEFRLTV
GRPLQPMLAHGAPSVAEAVDKLGACAVEEKLDGIRVQVHRSGDTVRVYTRTLDDITDRLP
ELTAAARELRGDSFILDGEVIALDAGGRPRPFQDIAGRVGSRVDVAAAAAELPLSPVFFD
ALSVAGRDLVDLPLTERHTELTALVPEPMRVRRTLVEDPADERQRAGAQEFFEATLGRGH
EGVVLKSLDAAYNAGRRGASWLKVKPVHTLDLVVLAAEWGSGRRTGKLSNLHLGARRPDG
SFAMLGKTFKGMTDEMLAWQTERLQELAVGGDGFVVRVRPELVVEIAYDGLQRSSRYPAG
VTLRFARVVRYREDKPADQADTVETVLSRRDV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgcccggctcgcccacgtgtccaaggaagtggccgccacttccgccaggtcc
cggaagatcgctctgctcgccgagctgttccgcgcggcggagccggaggacgtgccggtc
gtcatcccgtatctcgcggggcggctgccccagggacgcctcggcatcggctggagcacg
ctgaaggaggcggggccgcccgccggggaggcgacgctgaccgtggcgggggtggacgcg
gcactcaccgcgatcggcgcggtgtccggcgccgggtcccaggccgagcgcaggcgcctg
gtgggcgagctgctgggggccgcgaccgccgacgaacagaagctcctgaccggcctgctc
accggcgagctgcggcagggggccctggacgcggtcgccgtcgaggggctcgcggtggcc
accgggaccccggcggacgccgtgcggcgctcggtgatgttcgccgggggtgtggccccg
gtcgccgaggccctgctcgcacgcggcgccgaggcgctggaggagttccgcctgacggtg
ggccgcccgctccagccgatgctcgcgcacggcgccccgtcggtcgccgaggccgtcgac
aagctcggcgcgtgcgcggtcgaggagaagctggacggcatccgcgtccaggtgcaccgc
agcggcgacaccgtacgggtctacacgcgcaccctggacgacatcaccgaccggctgccg
gagctgaccgccgccgcgcgggagctcaggggggacagcttcatcctggacggtgaggtc
atcgcgctggacgccggcgggcgtccgcggccgttccaggacatcgcggggcgtgtcggc
tcccgcgtcgacgtggcggccgcggcggccgagctgcccctgtcccccgtcttcttcgac
gcgctgtccgtggcgggccgggacctggtggacctgccgctgaccgagcggcacacggag
ctgaccgccctggtccccgagccgatgcgggtccgccgcaccctggtcgaggacccggcc
gacgagcggcagcgcgccggggcccaggagttcttcgaggcgacgctggggcgcggccac
gaaggcgtggtgctgaagtcgctcgacgccgcctacaacgcgggccgcaggggcgcctcc
tggctgaaggtgaagccggtccacaccctggacctggtggtcctcgccgccgagtggggc
tcgggccgccgcaccggcaagctctccaacctgcacctgggcgcgcggcggcccgacggg
agcttcgccatgctcggcaagaccttcaagggcatgacggacgagatgctggcctggcag
accgagcgcctccaagagctggcggtcggcggggacggcttcgtcgtgcgggtccgcccc
gagctggtcgtcgagatcgcctacgacggcctgcagcgctcctcccgctacccggcgggc
gtcaccctgcgcttcgcccgcgtcgtgcgctaccgcgaggacaagcccgccgaccaggcg
gacaccgtcgagacggtgctgtcccggcgcgacgtgtga
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