Staphylococcus simiae: SAMEA4384339_2417
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Entry
SAMEA4384339_2417 CDS
T06955
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
ssim
Staphylococcus simiae
Pathway
ssim00260
Glycine, serine and threonine metabolism
ssim01100
Metabolic pathways
Module
ssim_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
ssim00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SAMEA4384339_2417 (betA)
Enzymes [BR:
ssim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
SAMEA4384339_2417 (betA)
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Gene cluster
GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
Pyr_redox_3
FAD_binding_2
DAO
Pyr_redox_2
NAD_binding_8
Lycopene_cycl
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
SNV83180
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All DBs
Position
1:complement(2525368..2527074)
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AA seq
568 aa
AA seq
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MSNNNKSYDYVIIGGGSAGSVLGNRLSEDKDKEVLVLEAGRSDYFWDLFIQMPAALMFPS
GNKFYDWIYSTDEEPHMGGRKVAHARGKVLGGSSSINGMIYQRGNPMDYEGWAEPEGMET
WDFAHCLPYFKKLETTYGAAPYDKYRGHDGPIKLKRGPATNPLFQAFFDAGVEAGYHKTP
DVNGFRQEGFGPFDSQVHRGRRMSASRAYLHPAMKRKNLTVETRAFVTQINYEGRRATGV
TYKKNGKLHTVDAKEVILSGGAFNTPQLLQLSGIGDSEFLKSKGIEPRVHLPGVGENFED
HLEVYIQHQCKQPISLQPSLDVKRMPLIGLQWLFTRTGAAASNHFEGGGFVRSNNDVDYP
NLMFHFLPIAVRYDGQKAPVAHGYQVHVGPMYSNSRGSLKIKSKDPFEKPSIRFNYLSTE
EDKREWVEAIKVARNILNQSALDPFNGGEISPGPEVQTDEEILDWVRRDGETALHPSCSA
KMGPASDPMAVVDPLTMKVHGMENLRVVDASAMPRTTNGNIHAPVLMLAEKAADIIRGRK
PLAPQYVDYYKHGVHDEHEGALDNKPYA
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataacaataaatcatatgattatgtcatcattggtggcggaagtgcagggtca
gtgcttggtaatcgactaagtgaagacaaagataaagaggtattagttttagaagctggg
cgtagtgattatttttgggatttatttatacaaatgcctgcagcactaatgtttccatca
ggtaacaaattttatgattggatttattcaactgatgaagaaccacatatgggtggacgt
aaagtagcgcatgctagaggtaaggtacttggtggatcaagttcaatcaatggtatgata
taccaacgaggtaatcctatggattatgaaggatgggctgaacctgaaggtatggaaacg
tgggactttgcacactgtctaccatattttaaaaagttggaaacgacttatggtgcggca
ccgtatgataagtatagaggtcatgatggtccgattaaattaaagcgtggtcctgccaca
aatcctttgttccaagcattctttgatgcaggtgtcgaagcaggttatcataagacgcca
gatgttaatggtttcagacaggaaggttttggtccatttgatagccaagttcatcgcggt
cgtcgcatgtcggcttcacgtgcttacttacatccagcaatgaaacgtaaaaatttaacg
gttgagacacgtgcttttgtcacacaaattaattatgaagggcgaagagcaacaggcgtt
acatataagaaaaacggtaaattacacactgttgatgccaaagaagtaatattgtcaggt
ggtgcttttaatacaccacaattattacaactatcaggtattggtgattcagaattttta
aaatcgaaaggtattgaaccacgcgtgcatttacctggtgttggtgagaattttgaagat
catctagaagtatatattcaacatcaatgtaagcagccaatatctttacaaccaagttta
gatgtcaaacgtatgccattgataggattacagtggctattcactcgtacaggtgcagca
gcatcgaaccattttgaaggtggcggatttgtgagatcgaataatgatgttgattatcca
aacttaatgttccactttttaccgatagcagttagatatgatggacaaaaagcaccagtt
gctcatggctatcaagtacatgttggacccatgtattctaactctagaggcagcttaaaa
attaaatcaaaagatccatttgaaaaaccaagtatccgttttaactatttatctacagag
gaagataaacgtgagtgggttgaagcaattaaagtagctagaaatattttaaatcaatcc
gccttggatccatttaatggtggagaaatttcaccaggacctgaagttcaaacagatgaa
gaaatattggattgggtacgtcgcgatggcgaaacagcattacatccatcatgtagcgcg
aaaatgggtccagcatcagatccaatggctgtagttgatccattaacaatgaaagtgcat
ggtatggaaaatttacgtgtcgtcgatgcgtcagcaatgccgcgtacaacgaatggtaat
atacatgcgccagtattaatgttagctgaaaaagcagcagacattattcgtggtagaaaa
ccattagcaccacaatatgtcgattattataagcatggtgttcatgatgaacatgaaggt
gcgctagacaataaaccttatgcataa
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