Streptococcus suis D12 (serotype 9): SSUD12_0808
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Entry
SSUD12_0808 CDS
T02021
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssk03016
]
SSUD12_0808 (truB)
Enzymes [BR:
ssk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SSUD12_0808 (truB)
Transfer RNA biogenesis [BR:
ssk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SSUD12_0808 (truB)
Prokaryotic type
SSUD12_0808 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AER19123
UniProt:
G7SFQ4
LinkDB
All DBs
Position
820083..820961
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AA seq
292 aa
AA seq
DB search
MISGIINVKKEAGMTSHDVVFKLRKILQEKKIGHGGTLDPDVTGVLPIAVGKATRMIEYM
QEEGKIYEGEITIGYSTTTEDASGDLVERTPVLYIAEQAVDEVMTSFVGTITQIPPMYSA
VKVNGRKLYEYARAGEEVERPQRQIEIYSFERTSPIELADDCAQFTFRVRCGKGTYVRTL
SVDLGAKLGYASHMSKLERTGSAGMDLADALTLEEISSLVAENDFSFLQPIERGIGDLPV
VELKEEQVKDAIFGRFVELNAEAERLAGFHDGQLIAIFEKRDQLYKPSKVLV
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagggattattaatgtaaaaaaagaggcaggtatgacctcgcatgatgttgtt
tttaagctccgcaagattttgcaggagaagaagattggtcacggtgggaccttggatcca
gatgtgacaggtgttctgcccattgcagtcggcaaggccacgcgcatgattgagtacatg
caggaagagggcaagatttacgagggggagattaccattggttactctaccacgacagaa
gatgcatctggcgatcttgttgagcggacaccggttttgtacatagcagagcaggcagtt
gatgaggttatgaccagtttcgtaggcactattacccagattccgcctatgtactctgct
gtcaaagtaaacggccgcaagctctatgaatacgcacgggcgggtgaagaagtcgaacgt
cctcaacgccaaattgagatttacagttttgaacggactagcccgattgaactagcagat
gactgtgcacagtttaccttccgagttcgctgtggtaagggcacctatgtccgcaccctg
tctgttgacctaggggctaagttgggctatgccagccatatgtccaagttggaacgaact
ggttcagctggaatggacctagcggatgccttgactttagaagaaatttcttcgctggta
gctgaaaatgatttttcatttctccaacctattgaacgtggtattggggatttacctgtt
gtagaattgaaggaagagcaggtgaaagatgctatatttggtcgatttgtagaattgaat
gcagaagcagagcgtttagcaggctttcatgatggtcagttgattgctatttttgaaaaa
cgcgaccagctgtataaaccaagcaaggttttggtctaa
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integrated database retrieval system
