Streptococcus suis D12 (serotype 9): SSUD12_1497
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Entry
SSUD12_1497 CDS
T02021
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssk
Streptococcus suis D12 (serotype 9)
Pathway
ssk03030
DNA replication
ssk03430
Mismatch repair
ssk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSUD12_1497 (holA)
03430 Mismatch repair
SSUD12_1497 (holA)
03440 Homologous recombination
SSUD12_1497 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssk03032
]
SSUD12_1497 (holA)
03400 DNA repair and recombination proteins [BR:
ssk03400
]
SSUD12_1497 (holA)
Enzymes [BR:
ssk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSUD12_1497 (holA)
DNA replication proteins [BR:
ssk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSUD12_1497 (holA)
DNA repair and recombination proteins [BR:
ssk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSUD12_1497 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AER19773
UniProt:
G7SI46
LinkDB
All DBs
Position
complement(1509975..1511006)
Genome browser
AA seq
343 aa
AA seq
DB search
MTVIEQIEKLKKEKLELLTVLCGEDIGQYQIAKDLLLRKLDFDAADLGFAYFDMSEADYH
QVDLDLVSLPFFSDEKVVILDYFADLTTDKKRHLTDDELKQFEAYLENPVETTRLVILAP
GKLDSKRRLVKLLKRDGLVLEANPLKEMDLKNHFQKEIMRLGLQMGGEVFQYLLEKSNFD
FAEISKNLAFLQSYKGKETIEISDIDAAIPKTLQDNIFDLTQLILQSKVDEARNLVRDLR
LQGEEEVKLIAIMLTQFRTYLQVQILVEQGRGEQQIVAELSTIMGRKVNPYQVKYALRDS
RHLSIGFLKKVVKLLIDTDFQIKTGQFDKDYLFDLLLLKIATA
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaattgaacagattgaaaaattaaaaaaagagaaattagagcttctgaccgtt
ttatgcggtgaagacatcggacaataccaaatagcgaaagacttacttctgaggaagctt
gattttgatgcggcagatttaggttttgcctattttgatatgtcggaggctgattatcat
caggtagacttggacctagtttctcttcccttcttttcagatgaaaaagtagtgattctt
gattattttgcagatttaacgacagataaaaaacggcatttgacagatgatgaactcaaa
cagtttgaggcctatttggaaaatcctgtcgaaacaacacgtttggtcattctagcaccg
ggtaagttggacagtaagcgtcgtctggtcaaactcctcaaacgagatggactagtattg
gaagccaatcctctgaaggagatggatttgaaaaatcatttccaaaaggagataatgcgt
cttggattgcagatgggaggagaggtttttcaatatcttttagaaaagtccaattttgat
tttgcagaaatcagtaagaacctagcctttcttcaatcttataagggaaaagagacgatt
gaaatttcagatattgatgcggctatccccaaaacactacaagataatatctttgattta
acacagttaattctacaatccaaggtagacgaggctcgcaacttagttcgtgacttgcga
ttgcaaggggaggaagaggttaagttgattgccatcatgttaacccaatttcgaacctat
ctacaagtgcaaatactagtagagcaaggccgaggggagcagcagatagtagctgagtta
tcaactattatggggcgtaaggtgaatccttaccaagtaaagtatgctttgcgtgattca
cgccatctgtccattggatttttgaaaaaagtcgtcaagctcctaatcgatacagatttt
caaattaaaacaggccaatttgataaggattatttatttgatttgctattattaaaaatc
gcgactgcatag
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