Sclerotinia sclerotiorum: SS1G_06839
Help
Entry
SS1G_06839 CDS
T01071
Name
(RefSeq) hypothetical protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ssl
Sclerotinia sclerotiorum
Pathway
ssl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SS1G_06839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssl03041
]
SS1G_06839
Enzymes [BR:
ssl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SS1G_06839
Spliceosome [BR:
ssl03041
]
Complex A
U2 snRNP components
U2 related factors
SS1G_06839
Complex B
SS1G_06839
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
5488511
NCBI-ProteinID:
XP_001592598
UniProt:
A7ENE0
LinkDB
All DBs
Position
Unknown
AA seq
1114 aa
AA seq
DB search
MADAIEIEEMMLEDRDIAVVLEVPTRRRRSRERDYRDRRDDSYDDRARRRREDSTDSWSR
SRGDENRGQTPRSDSGAKVHDAPKASAPAAQTEEQKKAERLAKLEAWKKKMAEDKERKEK
ELAAGGTRKLLDDIDQKANGSSSQPSPNTPTTPSTSAISGDLAPTNYAGKFDPKAIAKKA
VASSSSAHALGRDLPLKELSKTSATLTSTVKGLQADKKPTAFNSTSKVSALPKTRGNLSV
FGLGAKVTDNEKTYQKRALDFDEDEGSRKKLEKLPTLPMANSKEDDAALANGIEGQDDDD
DAELEAAGTEEEAAAAARAAAEKREERLQEAESQPHTNGDVHMEDAPQADSTAMDEDEEI
DPLDAFMEEMGDPFSLPKSNTTFVKNNTKSQPQEPEALFGDDDVDLKALDADPDEILAIA
NKARKKKDIPTINYANLNLPPFRKNFYTEPAELVDMTEAEINDLRLELDGIKVAGKDVPK
PVQKWSQCGLDVKSLDVIKKLGYDKPTSIQMQAIPAIMSGRDVIGVAKTGSGKTIAFLLP
MFRHIRDQRPLKNSDGPIGLIMTPTRELATQIHKECKPFLKAMGLRAVCAYGGAIIKDQI
ADLKRGAEIIVCTPGRMIELLAANSGRVTNLQRVTYVVLDEADRMFDMGFEPQVMKVFNN
IRPNRQTILFSATMPRIMDALAKKTLQSPVEIVVGGRSVVAPEITQIVEVREEKEKFHRL
LELLGELYNADEDARTLIFVDRQEKADDLLKDLMRKGYPCMSIHGGKDQVDRDSTIDDFK
AGVVPIMIATSVAARGLDVKQLKLVVNFDAPNHLEDYVHRAGRTGRAGNTGTAVTFITEE
QEQYSVGIAKALEQSGQEVPERLNEMRKSYKDKVKSGAKKESSGFGGKGLERFDAEREAT
KARERKIHKLNGDDDEEEKEEKDDDVLLKAASVVQPASASTAPPKLLGVPKGIDLDGDIK
VHRTETAASSSGSKNPLDKVTSAIDAINARLNKTGQLRSGVPIDNKGPDAGAFHATLEIN
DFPQKARWAVTNRTNVAKILEATGTSITTKGSFYPAGKEVQAGGDPKLYILVEGDTEVVV
TNAMRELMRLLKEGTMAAADAEGRAPASGRYTVT
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgcgatcgagatcgaagagatgatgttagaggacagagacatcgcagtcgtt
ctcgaagtcccgacgagaagacgcagaagtcgagaacgagattaccgtgataggcgagac
gactcttatgatgatagggctcgaagacgccgcgaggattctactgactcatggtctcgt
agcagaggagacgaaaatcgcggacagacacccagatcagatagtggcgcaaaagttcat
gatgctccaaaagcatcagcacccgctgcgcaaaccgaggaacaaaagaaagcagaacgt
ctagcaaaattagaagcgtggaagaagaagatggccgaagataaagagcgtaaggagaaa
gagctggctgcgggtgggactcggaaattactcgatgatatagatcaaaaggccaatggt
tcctcttcccaaccctcacccaacactcctacaactccttcaacttctgcgatatcaggc
gatctcgcaccaacaaattatgctgggaaatttgatccaaaggcgatagctaaaaaggca
gtggctagctcgagcagtgcgcatgctcttggaagggatttaccattaaaggaattgtct
aaaacgtccgccaccttaacttctacggtcaaaggattacaagctgacaaaaagccaaca
gctttcaacagcacctcgaaagtatctgcgttacctaaaacgagagggaaccttagtgtt
ttcgggctcggcgcgaaggttaccgacaatgaaaagacataccagaaacgtgctctagat
ttcgatgaagatgaaggatcaagaaagaaactagaaaagctaccaaccctaccaatggca
aactccaaggaagatgatgctgcgctcgctaacggtattgagggacaagatgatgacgat
gatgctgaactggaagctgccggcacggaagaagaggccgcagctgcagccagagcagcc
gcagagaagcgcgaagaaaggttgcaagaagctgaatctcaaccacacacaaatggcgat
gtccacatggaagatgctcctcaagctgattcgactgccatggatgaagatgaagaaatc
gacccactggatgcttttatggaagaaatgggagaccctttctccttaccgaaatccaac
acaacatttgtcaagaataataccaagagtcaaccacaagaaccggaagctttattcggt
gatgatgatgtggacctgaaagccttggacgcggacccggatgaaatccttgcgatcgca
aataaagccagaaaaaagaaggatattccaaccatcaattatgcaaatttaaatcttccg
ccattccgcaagaacttttataccgaaccagcggagcttgtggatatgactgaagctgaa
ataaacgacttacgacttgagcttgatggtattaaagtagccggtaaggatgttcccaag
cccgtacaaaagtggtctcaatgtggtcttgatgtgaaatccctggacgttataaagaaa
ctaggatatgacaagcccacctccattcagatgcaagctattccggcaataatgtctggc
cgagatgttattggagtagctaagacaggatcgggtaaaaccatcgccttcttgctaccc
atgtttcgtcatattcgagatcaacgcccattgaaaaattctgatggacctatcggtttg
atcatgactcctacgcgagaattggcaacacagattcataaagagtgtaagcctttcttg
aaggcaatgggactccgtgcggtctgcgcatatgggggtgccattatcaaagaccaaatt
gccgatctcaaaaggggcgcagaaataatcgtttgcactcctggaagaatgattgaatta
ttggcggccaattctggtagagttacaaatcttcaacgtgtcacatatgttgttctagat
gaagctgaccgtatgtttgatatgggatttgagccccaagtcatgaaggttttcaataat
attcgacctaacagacaaactattcttttctcagctaccatgcctcgaatcatggatgca
ctagctaagaagacgctgcagtcaccagtagaaattgttgttggtggaagaagtgttgtt
gcgcccgaaatcacacaaattgttgaagtccgagaggagaaagaaaagtttcacagactt
ttggagcttcttggagagctctacaatgctgatgaagatgctcgaacactcatctttgtt
gatcgtcaagaaaaagctgatgacttactgaaggacctaatgagaaaaggttacccatgt
atgtctattcatggaggaaaggatcaagttgatcgtgattccaccattgatgatttcaaa
gccggcgtggttcctattatgattgctacctcagtagctgccagaggccttgatgtcaag
cagcttaagctcgttgttaatttcgatgcacctaatcatctagaagactacgttcacagg
gctggacgaactggcagagctggtaatactggtactgctgtcacttttataacagaagag
caagaacaatattcggtaggtattgcgaaagcccttgaacaatctggacaagaagtacca
gaaaggcttaatgagatgaggaagtcatacaaagataaggtcaaaagtggtgctaaaaaa
gagagttcaggttttggtggaaagggtctggaacgttttgatgctgagcgcgaagctacc
aaagctcgcgaacgcaagatacacaagcttaatggcgatgacgatgaagaggagaaagaa
gagaaagatgatgacgttcttctcaaagctgcatccgtggttcaacccgcctctgcttct
actgctccacctaaactgcttggtgtacctaaaggtattgatctcgatggagatattaaa
gtccatcgcaccgaaactgcagccagctctagcggatccaaaaatccgctcgataaagtc
acgtcggccatcgacgccatcaatgcccgtctcaataaaacaggacaactccgctctggt
gtcccgattgataacaaaggacctgacgcaggtgctttccacgccacgttggaaatcaac
gatttcccacagaaagctagatgggctgttacgaatcgcacgaatgtggccaaaattcta
gaagcgacgggtacgagtattactaccaaaggtagtttttacccggctggaaaagaggtc
caggctggtggagatcctaaactgtatattttggtcgagggtgatactgaggtcgtggtt
acgaatgctatgagagagttgatgaggttgttgaaggagggaacgatggcggctgctgat
gcggagggaagggctccggccagtgggaggtatactgttacttag
DBGET
integrated database retrieval system
