Sediminispirochaeta smaragdinae: Spirs_1226
Help
Entry
Spirs_1226 CDS
T01287
Name
(GenBank) extracellular solute-binding protein family 1
KO
K17318
putative aldouronate transport system substrate-binding protein
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Spirs_1226
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssm02000
]
Spirs_1226
Transporters [BR:
ssm02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Putative aldouronate transporter
Spirs_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
ADK80353
UniProt:
E1R2S1
LinkDB
All DBs
Position
1296353..1297738
Genome browser
AA seq
461 aa
AA seq
DB search
MKKQLFLCKGYVLVLLLAVCALNLWAQGEKEEEKVIWVTSVQGGREPEENVLFENEVKRL
TGVEVSMIKPPSSEYSTKLTAMLATGEPLDIVYIDSSLMASLKDQDLFEPLTDRIEASKV
LHDPSIIDPAEWERIRDKDGEIYGVFNKFEQGTLPIIRYDWLENLELEVPTTLDEYYRVL
KAFTFDDPDGNGEDDTYGLAVGYSLYDLSSLFGAYGLARGFVKDETGNLYSPYATEAAIP
VYEFLARLYREGILEPNFITNKSSNFRDMFMTGKAGMTFYWAAWVGLFNQTVKAERPDSP
FKARGITPPKGPDGTIMCRAGNDGLMAIPRVSKHKDAAFKVIEFWHSYDGNILSTLGIKD
HDYTFDNGTYELTELGKAHAMDHGAPQPKSLAWVNPFGELEGFEKAAEIVRTYGKPQYVT
AYDKQWEEISRAEAAKIILGKISPEEGIANMNKRFEQEGIF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacagctatttttatgtaagggctacgtgttggtgctgctgcttgcggtatgt
gcccttaacctttgggcgcaaggagagaaagaagaagagaaggtgatctgggttacctcc
gttcaaggcggccgggaacctgaggaaaatgttctatttgagaatgaggtcaagcgtttg
acaggggtcgaggtatccatgatcaaaccgccttccagcgagtacagcacaaagttgacg
gcgatgctggcaacgggagaaccccttgatattgtctacatcgattcttccctgatggca
agcctgaaagaccaggatctctttgaaccacttaccgataggatcgaggcgtcgaaagtc
ttacatgatccttcgattatcgatccggccgaatgggaacgcattcgtgataaggacggg
gagatctacggggtatttaataaatttgagcagggaaccttaccgattatccggtacgat
tggcttgagaatctggaactggaagtgccgaccaccttggatgaatactacagggtattg
aaggcgtttacctttgacgatcccgacggcaacggagaagacgatacctatggcctcgcc
gtcggttatagcctttacgatctctcgagcctcttcggtgcctacggtcttgcccggggc
tttgtaaaagatgagacgggaaacctttactccccgtatgccacggaagcggcaattcct
gtctatgaattcctggccagattatatcgagagggaatccttgaaccgaatttcattaca
aacaaatcttccaattttcgcgacatgttcatgaccggtaaagccggcatgaccttctac
tgggccgcatgggtgggcctgtttaatcaaacggtaaaggctgaacggcccgattctccg
ttcaaggccagaggcattactccccccaaggggcccgatggaacgatcatgtgccgtgcg
ggcaacgacggccttatggctatcccacgggtatcaaaacataaagatgcggcattcaag
gtgattgagttttggcatagctatgatggaaatatcctctcgaccttgggcataaaagat
catgattacacctttgataatgggacttatgagctgaccgagctgggcaaggcccatgcc
atggatcacggtgctccacaaccgaagtctcttgcctgggtaaatccctttggcgagtta
gaaggatttgagaaggcggccgaaattgtcagaacatatggaaagcctcagtatgttacc
gcatacgacaaacagtgggaagagatatcgcgggcggaagccgctaaaatcattctggga
aagatttctcccgaagagggaatcgcaaacatgaataaacgcttcgaacaagaaggcata
ttctaa
DBGET
integrated database retrieval system
