Sediminispirochaeta smaragdinae: Spirs_1720
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Entry
Spirs_1720 CDS
T01287
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K18933
tyrosine decarboxylase / aspartate 1-decarboxylase [EC:
4.1.1.25
4.1.1.11
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00350
Tyrosine metabolism
ssm00410
beta-Alanine metabolism
ssm00680
Methane metabolism
ssm00770
Pantothenate and CoA biosynthesis
ssm01100
Metabolic pathways
ssm01110
Biosynthesis of secondary metabolites
ssm01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
Spirs_1720
09105 Amino acid metabolism
00350 Tyrosine metabolism
Spirs_1720
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
Spirs_1720
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
Spirs_1720
Enzymes [BR:
ssm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.11 aspartate 1-decarboxylase
Spirs_1720
4.1.1.25 tyrosine decarboxylase
Spirs_1720
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
Beta_elim_lyase
SepSecS
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADK80847
UniProt:
E1R682
LinkDB
All DBs
Position
complement(1853454..1854632)
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AA seq
392 aa
AA seq
DB search
MEDTTEGIPLQGSGEADVLGALGRKLEGDLSFSGERILGSMCTLPHPTSAKVYEHYLDRN
IGDPGLHPRLQQLERETIGMLGRLLGSRSAEGAIVTGGTEANLIALWAAKRKHREKRKVV
LPESAHFSFDKAADIMDLDLCKIPVEDDGRVDLKRYLEAIDDKTMVLVAVAGTTGLGAVD
PITEISDAATAWKLPLHVDAAFGGFVLPFLAEAGYTAPAFDFSLPGVSSITIDPHKMGRC
AIPAGAIVFRNHDAAVASETEVSYLAGGKTRQRTIVGTRSGASVASIWATLHRLGRKGYV
ETVATCMENSCYLYDRLRSMSGVDAVIEPQMNVVGFSPTKHRRIDPDELARRLRGRGWAL
SLFPGFLRITVMPHVSRKMLDAFLHDLEEIIA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggaagatacgacagaaggaattccccttcaaggctctggggaagccgatgtacttggt
gcgctgggcagaaaactggagggtgatctctctttttcgggagagcgaattctcggatcg
atgtgtacccttccccaccccaccagtgcaaaggtctatgaacattatctcgaccgaaat
ataggagatccggggctgcatccacggcttcagcagctggagcgggaaacaatcgggatg
ctgggtcgtctattgggaagtcggagcgcggaaggcgcaatcgtcacgggcggaacagag
gcaaaccttatcgccctctgggctgccaaacgaaaacatagagaaaaacggaaggtggta
cttcccgaaagtgcccatttctcgttcgacaaggccgccgacatcatggaccttgatctt
tgtaagattccggtggaggatgacggcagggtcgatctgaaacgatatctcgaagcaata
gatgataagaccatggtacttgtggcagttgccgggacaacaggtctcggggcggtcgac
cctatcaccgagatatccgatgcggccacggcatggaagcttcctctccacgttgatgcc
gccttcggcggatttgtcctgcccttccttgccgaagcaggatacaccgcaccagccttt
gatttctccctgccgggtgttagcagtatcaccattgatccacataaaatggggcgctgt
gccattccggccggcgctattgtttttcgaaatcacgatgctgcggtggcatcggaaacc
gaagtgagctatcttgccggagggaaaacacgacagcgtaccatcgtgggaaccagatcc
ggggcctcggtggcgtcgatttgggccacgttacatcgtcttggaagaaaaggctatgtt
gaaaccgtggcaacgtgcatggaaaacagctgttatctctacgatcgattacgctccatg
agcggtgtagatgccgtaatcgaaccgcaaatgaacgtagtagggttcagccccacaaaa
catcgtaggatcgatccagacgagctggcccgccgactgcgaggtcgcggctgggccctc
agcctcttccccggctttctcagaatcacggtaatgccgcatgtaagcagaaagatgttg
gatgcctttttacatgacctcgaggagataatagcatga
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