Sediminispirochaeta smaragdinae: Spirs_4248
Help
Entry
Spirs_4248 CDS
T01287
Name
(GenBank) NAD-dependent epimerase/dehydratase
KO
K08679
UDP-glucuronate 4-epimerase [EC:
5.1.3.6
]
Organism
ssm
Sediminispirochaeta smaragdinae
Pathway
ssm00053
Ascorbate and aldarate metabolism
ssm00520
Amino sugar and nucleotide sugar metabolism
ssm00541
O-Antigen nucleotide sugar biosynthesis
ssm01100
Metabolic pathways
ssm01240
Biosynthesis of cofactors
ssm01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
Spirs_4248
00520 Amino sugar and nucleotide sugar metabolism
Spirs_4248
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Spirs_4248
Enzymes [BR:
ssm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.6 UDP-glucuronate 4-epimerase
Spirs_4248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
Motif
Other DBs
NCBI-ProteinID:
ADK83322
UniProt:
E1RA03
LinkDB
All DBs
Position
complement(4588488..4589498)
Genome browser
AA seq
336 aa
AA seq
DB search
MKKILVTGAAGFIGHATVCTLLDAGWTVVGIDSINDYYDTALKYARLHTTGIGEEGVEYG
KMIGSSCYPEYRFMQLALEDRDAVARLFREENFDVVCNLAAQAGVRYSLENPFAYADSNL
TGFLSILEACRHADVSYLVYASSSSVYGENRSVPFRESDRVDNPVSLYAATKKANELMAS
AYSRLYGFSTVGLRFFTVYGPWGRPDMAPTLFLSAMFEGRPIKVFNNGNMKRDFTYIDDI
VSGVVQVISSPKNDGSHTLYNIGRGKPVDLSEFIDLLEKYSGRKAQRNLLPIQPGDVPIT
WADTSCLERDFAYRPSTPVEAGIAQFVEWYREFYGE
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaagatacttgtaacgggagcggcggggtttatcggtcatgcaaccgtctgtaca
ttgcttgatgcaggatggacggttgtcggtattgattcgattaatgactattatgataca
gctttgaaatatgcacgccttcatacgaccggtatcggggaggagggtgtggaatatgga
aaaatgataggttcttcctgttaccccgaataccgttttatgcaattggcccttgaagat
agggatgctgttgcccgtctttttcgggaagagaattttgatgttgtctgtaacttggcg
gcacaggccggggttcgctatagtctggaaaatccttttgcttatgcggatagcaatttg
actgggttcctttcgatccttgaggcgtgtcgtcatgccgacgtttcgtatcttgtgtac
gcatcaagttccagtgtctatggagaaaatcgttcggtgccttttcgggaaagcgatcgg
gtcgataatccggtcagcttgtacgctgcaactaaaaaggccaacgagcttatggcatct
gcctatagtcgcctatacggcttttctactgtggggctccgcttttttaccgtatacggt
ccttgggggcgtcccgatatggctccgacgctttttctttccgcaatgtttgaaggcagg
cccatcaaggtattcaataatggtaatatgaagcgggattttacctatatcgacgatatt
gtctcgggagttgtacaggttatttcttctcctaaaaatgatggttcccacactctctac
aatatagggaggggaaaacctgtcgatctctcggagtttatcgacctccttgaaaaatat
tccggacgtaaggcccaaaggaatttacttcccatacagccaggcgatgttcccatcacc
tgggccgatacctcctgccttgaacgggatttcgcctacaggccctctacgcctgtggaa
gcggggatcgcgcagtttgttgaatggtatcgagagttttacggtgagtag
DBGET
integrated database retrieval system
