Shigella sonnei Ss046: SSON_4444
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Entry
SSON_4444 CDS
T00274
Symbol
holC
Name
(GenBank) DNA polymerase III chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
ssn
Shigella sonnei Ss046
Pathway
ssn03030
DNA replication
ssn03430
Mismatch repair
ssn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSON_4444 (holC)
03430 Mismatch repair
SSON_4444 (holC)
03440 Homologous recombination
SSON_4444 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssn03032
]
SSON_4444 (holC)
03400 DNA repair and recombination proteins [BR:
ssn03400
]
SSON_4444 (holC)
Enzymes [BR:
ssn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSON_4444 (holC)
DNA replication proteins [BR:
ssn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSON_4444 (holC)
DNA repair and recombination proteins [BR:
ssn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSON_4444 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
AAZ90922
ShiBASE_China:
SSO4444
UniProt:
Q3YU90
LinkDB
All DBs
Position
complement(4714389..4714832)
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AA seq
147 aa
AA seq
DB search
MKNATFYLLDNDTTVDGLSAVEQLVCEIAAERWRSGKRVLIACEDEKQAYRLDEALWARP
AESFVPHNLAGEGPRGGAPVEIAWPQKRSSSPRDILISLRTSFADFATAFTEVVDFVPYE
DSLKQLARERYKAYRVAGFNLNTATWK
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacgcaacgttctaccttctggacaatgacaccaccgtcgatggcttaagcgcc
gttgagcaactggtgtgtgaaattgccgcagaacgttggcgcagcggtaagcgcgtgctc
atcgcctgtgaagatgaaaagcaggcttaccggctggatgaagccctgtgggcgcgtccg
gcagaaagctttgtcccgcataatttagcgggagaaggaccgcgcggcggtgcgccggtg
gagatcgcctggccgcaaaaacgcagcagcagcccgcgcgatatattgattagtctgcga
acaagctttgcagattttgccactgctttcacagaagtggtagacttcgttccttatgaa
gattctctgaaacaactggcgcgcgaacgctataaagcctaccgcgtggctggtttcaac
ctgaatacggcaacctggaaataa
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