Shewanella spartinae: K0I31_00160
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Entry
K0I31_00160 CDS
T09209
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sspa
Shewanella spartinae
Pathway
sspa01501
beta-Lactam resistance
sspa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I31_00160
01503 Cationic antimicrobial peptide (CAMP) resistance
K0I31_00160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_00160
01504 Antimicrobial resistance genes [BR:
sspa01504
]
K0I31_00160
Transporters [BR:
sspa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
K0I31_00160
Antimicrobial resistance genes [BR:
sspa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
K0I31_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Patched
Motif
Other DBs
NCBI-ProteinID:
QYJ93863
LinkDB
All DBs
Position
34396..37545
Genome browser
AA seq
1049 aa
AA seq
DB search
MARFFIDRPIFAWVIAIIVMLAGVLSIMKLPVSQYPSIAPPTVVINAIYPGASAKTMEDT
VTQVIEQRMTGIDHLRYISSTSDSFGNAQITLTFNAEADPDIAQVQVQNKLQLAMPLLPQ
EVQAQGVKVNKSSSGFLMVLGFVSQDGSLEKNDISDYVGSNILDPMSRVPGVGEIQLFGA
QYAMRIWLDPLKLTQYNLTSLDIMASIREQNAQVSAGQLGGAPSIAGQELNATVTAQSRL
QTAEEFRKIIIKSDPSGAKVYLEDVARVELGSESYSVESFYNGRPAAGLAIKLATGANAL
ATAERVREKVDEMKPFFPQGLEVVYPYDTTPFVEKSIEGVVHTLLEAVVLVFVIMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSATGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEDGLSPIEATKKSMDQITGALVGIGLTLSAVFVPMAFMSGSTGVIYRQFSVTIVSAMAL
SVLVAIILTPALCATMLKPIAKGHHAVETGFFGWFNRTFDKMTSRYEAGVAAMIKRAGRV
MLIYVALTVAVGWIFMRMPTAFLPDEDQGILFTQAILPTNSTQESTKKVMSKISDFYLNE
TGDSVKSVFSVSGFSFAGSGQNMGLAFVGMKDWSERTGPGQDVKSVAGRAMGMFMQMKEA
FVFAFVPPAVIELGTANGFDFYLQDRNGQGHEKLLEARNMLLGMASQNPNLVGVRPNGQE
DAPMYRIHIDHAKLRALSIDIDAVNSVLGTAWGGSYVNDFIDRGRVKKVYVQGDAQYRMQ
PEDLDTWYVRNSQGEMVPFSAFATGTWEYGSPRLERFNGLPAMNIQGGTAQGYSTGAAMA
DIEAMVAKLPPGFGVEWNGLSYEERLSGNQAPALYALSIMVVFLVLAALYESWSVPFAVI
LVVPLGIIGALLAMNGRGLPNDVFFQVGLLTTVGLATKNAILIVEFAKEFYEKGAGLVEA
TLHAVRVRLRPILMTSLAFGLGVVPLAISSGVGSGSQNAIGTGVLGGMMSSTFLGIFFIP
IFFVIVERIFSKREKKGAETQAADSTPQE
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggctcgttttttcatcgatcgccctatctttgcctgggtgattgcaattattgttatg
ttggccggggtgctctctatcatgaagcttcccgtgtcgcagtacccgagtattgcgccg
ccgaccgtggtgattaacgccatctatccgggtgcgtctgccaagactatggaagacact
gtgacccaggtgatcgagcagcgcatgacgggtatcgaccatctacgttacatctcgtct
accagtgacagctttggtaacgcgcagatcaccctgacgttcaatgccgaggccgatccc
gatatcgcccaggttcaggtgcagaacaagctgcagctggcgatgccgctgctacctcaa
gaggtgcaggcgcaaggggttaaggtcaacaaatccagctcgggtttcttgatggtattg
ggcttcgtgtctcaggatggctcgctggagaagaatgatatctccgactatgtgggctct
aacatcttagaccctatgagtcgtgtgcctggtgtgggtgagatccagctgttcggtgcc
cagtacgccatgcgtatatggctagacccgctcaagctgacgcaatacaacctcaccagc
ctggacatcatggcctcgattcgtgagcagaatgctcaggtgtctgcgggtcagttgggc
ggcgcgccttctattgcgggtcaggaactcaacgccacggtaacggctcagagtcgtcta
cagacggccgaagagtttagaaagatcatcatcaagtccgatccgtcgggcgccaaggtt
tacctggaagatgtggcccgagtcgaactgggctcggaaagctattcggtagagtccttc
tataacggccgtccggctgccggtctggcgatcaagttggccacgggggctaacgccctg
gcgaccgccgagcgcgtgcgtgagaaggtcgatgagatgaagcccttcttcccccaaggc
ctggaagtggtttatccctatgacaccacccccttcgtcgagaagtcgatcgagggcgta
gtgcataccctgctggaagccgtggtactggtattcgtgatcatgtacctcttcttgcag
aacttccgcgcgaccctgatcccgaccatcgcggtacctgtggtactgctggggaccttc
gccatcctgtcggctaccggcttctcgatcaacaccctgaccatgttcgccatggtattg
gccatcggtctgctggtggatgacgccatcgtggtggtagagaacgtcgaacgtgtgatg
tccgaagacggcttgagcccgattgaggccaccaagaagtcgatggaccagatcaccggc
gccctggtgggtatcggtctaaccctgtcggcggtgttcgtgcctatggcattcatgtcg
ggttcgaccggtgtgatctatcgtcagttctccgtgactatcgtatcggccatggcgctt
tctgtgctggtggcgatcatcctgacgccggcactgtgtgccaccatgctgaagccgatt
gccaagggccaccatgcggtggagaccggcttcttcggttggtttaaccgcacctttgac
aagatgacctcgcgttacgaggctggcgtggcggcgatgatcaagcgcgccggtcgcgtc
atgttgatctacgtggccctgacggttgccgtgggttggatcttcatgcgcatgccgacc
gccttcttgccggacgaagaccagggtatcttgtttacccaggctattctgccgaccaac
tcgacccaagagagcaccaagaaggtgatgagcaagatctccgacttctatctcaacgag
acgggcgacagcgtcaagtcggtatttagcgtatcaggcttcagcttcgccggtagtggt
caaaacatgggtctggccttcgtgggcatgaaagactggtctgagcgtaccggcccgggt
caagacgttaaatcggtcgccggacgtgccatgggtatgttcatgcagatgaaggaagcc
ttcgtgtttgccttcgtaccgcctgcggtgatcgagctgggtacggcaaacggtttcgat
ttctatctgcaagacagaaatggccaaggccatgagaagctgctcgaggcccgcaacatg
ctgctgggcatggcatcgcagaatcctaacctggtgggcgtgcgtccaaacggtcaggaa
gatgcgcctatgtatcgcatccatatcgaccacgctaagcttcgcgccctgagtatcgat
atcgatgcggtcaacagcgtgctgggtactgcctggggtggtagctatgtgaacgacttt
atcgaccgtggtcgtgtgaagaaggtctacgtacagggtgatgcccagtaccgtatgcag
ccggaagacctcgatacctggtatgtgcgtaacagccagggtgagatggtgcctttctcg
gccttcgccacaggtacctgggaatatggttcgccgcgtctggagcgtttcaacggtctg
cctgcgatgaacatccagggcggtacggcacaaggttatagtacgggtgcggccatggcc
gacatcgaggctatggtagccaagctaccgccaggattcggcgttgagtggaacggcctg
tcatacgaggaacgtctctcgggcaaccaggcaccggcgctgtatgccctgtctatcatg
gtggtcttcctggtattggcggccctgtatgagagctggtctgtgccgttcgcggtgatc
ttggtagtgccattggggatcataggtgccttgctggcgatgaacggtcgcggtctgcct
aacgacgtgttcttccaggtgggtctgttgactaccgtaggtctggcgaccaagaacgcc
atcctgatcgtcgaattcgccaaagagttctacgagaagggcgcgggtctggtggaagcg
accctgcatgcggtgcgtgtgcgtctacgtcctatcctgatgacctcgctggccttcggt
ctgggtgttgtgccactggccatcagctcgggcgtaggctcgggtagccagaacgctatc
ggtaccggcgtattgggcggcatgatgagttcgaccttcctggggatcttctttatccct
atcttcttcgtgatcgtcgagcgcatcttcagcaagcgcgagaagaagggcgccgaaact
caggctgccgactcgacaccgcaagaatag
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