Shewanella spartinae: K0I31_02805
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Entry
K0I31_02805 CDS
T09209
Name
(GenBank) mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_02805
Transporters [BR:
sspa02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I31_02805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
QYJ94344
LinkDB
All DBs
Position
complement(621641..624823)
Genome browser
AA seq
1060 aa
AA seq
DB search
MSRILLIILCLISFSGAANSPLNLNKRLGLGQEPQVASKSTAEQLSLLEEQLTEQQALQS
SFDAIIHQYQSQKQALTQQLKEAATPLEYNPKQDLSQQASLSYLRLSELKETEANLATQV
NELIKRQQQLPSLISQANLTLAKHKQATSDDNQPLSEMQRRVYVQSLSTLESELASSQKQ
IALTQQQLALVRSQLVQQEALIERLNGAIAEQRHKATAATIAASQIETSITDDAIAIKLN
AQNQAYGEQLKQLTHEVTNVMTLQEQAETQYQFQAKQITNIQQQIALVKLNSAFGERFLR
ILYSLPKPPSQDKISNEIANARLARYQIEQDQTLHPLLGDTEQLTPLQSKLVGAQKELQR
QLLENYDLYLGELAELRVLYEQLSQQYQTLKTTLNEHLFWVANANSIDGYWLGDLYQSTQ
WLLTQAPWHQVQDSLSEQSTLWSWWVILMVLCLVMQDLVTPKFTQLMAKNVTYVGNVTQD
KFIYSFNTLIGSLLYSCIKPLPLISGGLIFYFSNHNLVSSVGMGILAIGMLYQLYRLTYL
LALDKGLLIGHFKGDKTIIRAGQQRLRALTVLAMPIVGVIGFTEVLETSLVRNSLGRGAF
ILLALMLFWFYRDMLSLSKQEHHYHQDDKNKRLLQKLLWSILILLPPACAVLAFRGYYFT
AYQMLLQLQLSLILSLSFMLLYQLIKRWMLIERRRIAFNRAKAKRAEILAQREKEDDPNS
NEPPDTYEEPVVDLETISSQSLGLVRSLLTLAFLISLIGLWTQTHSAIFSFLDGITLWTS
SSTVDGIAQQIPITLKSLLLGLIIVGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTV
SRYLVVFFGMLSGFSTLGMEWSKLQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRI
GDTVTIRELTGTVSKIQIRATTIVDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVS
VARDSDPARVEAALYQAVKECDDALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLR
HKLHKQVSKKLRENHLELAYPQLEVHISGQSKETQGIIRS
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtatattactgattattctctgtctaatctcattctcaggcgccgcaaattcg
cccctgaatctcaataaacgcctgggactaggacaggagcctcaggtcgccagcaagagc
accgccgagcagctgagtctgctggaggagcagctcaccgagcaacaggccctacagtcc
agcttcgacgccatcattcaccagtatcagagccagaaacaggccctgacacagcagctt
aaagaagccgccacgccactggagtacaatcccaaacaagatctgagccagcaggcgtca
ctctcctacctgagactgtctgagctcaaagagacagaggctaacctggccactcaggtc
aacgagttaatcaaacgccagcagcaactacctagcctgataagccaggccaacctgacc
ctggccaagcacaaacaggcgaccagcgacgacaaccagcccctgagcgagatgcagcgc
cgggtctatgttcagagcctgtcgaccctggagtctgagctggccagcagccagaaacag
atcgccctgacccagcagcagttggcgctggtgcgcagccaactggtgcagcaagaggcc
ctgatcgaacgcctcaacggcgccatcgccgagcagcgtcacaaggcgacggcggccacc
atagctgccagtcagatagaaacctccatcacagacgatgccatcgccatcaagctgaac
gcgcagaaccaggcctacggcgagcagctgaaacagctgacccatgaggtcaccaatgtt
atgacactgcaggagcaggccgagacccaataccagttccaggctaagcagatcaccaac
attcaacagcagatcgccttggtgaagcttaactcagccttcggcgagcgcttcctgcgt
atcctctactcactgcccaagccgccaagccaggacaagatcagcaatgagatcgccaat
gcccgcctggcccgctaccagatagagcaagatcagacactgcatccgctactcggcgac
accgagcaactcacgccgctgcagagcaagctggtcggtgcccagaaagagctgcagcgt
cagctgctggaaaactatgatctctaccttggtgagctcgccgaattaagggtgctgtat
gagcagctgagccagcagtatcagacccttaagaccaccctcaacgagcacctgttttgg
gtggccaacgccaacagcatagacggctactggctgggcgacctgtatcagagtacccaa
tggctgctgacccaggcgccttggcatcaggtacaggactccctgagcgaacaaagcacc
ctctggtcctggtgggtgatcttgatggtgctctgcctggtaatgcaggacctggtcacg
cctaaatttacccagctgatggcgaaaaacgtcacctatgtgggtaacgtcacgcaagat
aagtttatctatagtttcaataccttgattggctcgctgctctatagctgcatcaagcca
ctgccgttgattagcggcggtctgatcttctacttcagcaaccataacctggtctcctcg
gtgggcatgggcatactggccataggcatgctgtaccagctctatcgactcacctatctg
ctggcgctggacaagggcctgttgatcggccacttcaagggcgacaagacgatcatacgc
gccggtcagcaacgcctgcgcgccctgaccgtactggcgatgccgattgtcggcgtgatc
ggcttcaccgaggtgctagaaacttcgctggtgcgcaacagcctgggacgcggcgccttc
atcctgctggccctcatgctgttctggttctaccgcgacatgctgagcctgtcgaagcag
gaacatcactatcaccaggacgataagaacaagcgcctgttgcagaagctgctctggtcg
atactcatcctgctgccgccggcctgtgccgtgctggccttcaggggctactacttcacc
gcctatcagatgctgctgcagctacagctgtcgctgatcttatccctaagcttcatgctg
ctgtatcagctgattaagcgctggatgttgatcgagcgacgccgcatcgcctttaaccgc
gccaaggccaagcgcgccgagatcttggcccagcgggagaaagaagatgaccccaacagt
aacgagccgccggacacctatgaagagcctgtggtggatctcgagaccatctccagccag
tcgctggggctggtacgttcactgctgacgctggcctttctgatcagcctgatcggcctc
tggactcagacccatagcgccatcttctcgtttctggatggcatcaccctgtggaccagc
tcgagcacggtcgacggcatcgcccagcagatccctatcaccctcaagtccctgctgctg
ggacttatcatagtcggcttctcgctgatgatagccaccaacctgccgggcctgctggag
ctgatgattctgcaaagattggatctcacccagggcacgggcttcgccatcactacagtc
agtcgctatctggtggttttcttcggtatgctcagtggcttttcgaccctggggatggag
tggtctaagctgcaatggctggtcgcggcgctttcggtgggcttaggtttcggtctgcag
gagatcttcgccaacttcatctcgggcctaatcatcttgttcgagaagcctgtgcgtatc
ggcgataccgtcaccattcgcgagctgaccggtacggtaagtaagatccagatccgcgcc
accacgattgtcgattgggacagaaaagagataatcgtccccaataaggccttcattacc
gagcagctgatcaactggtcgctgtcagacccgatcactagggtgatcgtctatgtctcg
gtcgccagggactcggatcccgcgcgggtcgaggcggcgctctatcaggcggtcaaggag
tgtgacgatgccctgaccacgccggagcccgaggtctggtttgccggatttggtcagcat
actcaggattatgagatccgcgcctatgccaaggatatgaacacccgatggccgctacga
cacaagctgcacaagcaggtcagcaagaaactcagagagaatcatctggagctcgcctat
ccgcagctcgaggtgcatattagtggtcaaagtaaagagactcaggggataattagaagc
taa
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