Shewanella spartinae: K0I31_07960
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Entry
K0I31_07960 CDS
T09209
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K19789
DNA repair protein RadD
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_07960
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
K0I31_07960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_30
AAA
DZR
SLFN-g3_helicase
AAA_22
zf-ribbon_3
AAA_16
zinc_ribbon_2
zf-tcix
SNF2-rel_dom
UPF0547
Zot
VESA1_N
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QYJ95276
LinkDB
All DBs
Position
complement(1766498..1768237)
Genome browser
AA seq
579 aa
AA seq
DB search
MQLRDYQRQAVDAAINHFKHSDDSALLVLPTGAGKSIVIAELARIAKGRTLVLTHVKELV
AQNAEKVGLLTDEASIFSAGLKQKSTRNKTVVASIQSAVRNPKQFDEPYSLVIIDECHRV
SNEKESQYQQLLSHLRTQNPKLRLLGLTATPYRLGSGWIYRYHYHGKIGNTEQPVFEHCI
FELPMRPLIKQGFLTPPKVLDGLSAQYDFSELSPNANGEYNEAEVDSLLDHAGRATKAIV
EQIKQLTNTRAGTIIFAATVRHAKEIMTLLDSPEAGLITADTPSQERDAIIDAFKRRELS
YLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRICEGKRDCLVIDYAANGFD
LFFPEVGRPKPDSKSVPVQVPCPECGFANIFWGLVDGDGDIIEHFGRRCQAVVDDGDSKH
QCDFRFRSKACPNCGEENDIAAKVCQHCQSTLIDPDKRLKEVLQQKHHHLFRCQEMLFEA
DNDRLRVRYLDIEGNDFCCYFNFATKAQIRAFYGVFVHQHTRTPGQKQPTFSKVDQVIAA
RDHFRMPDLLLLKKGKRGWELVERFFDYRGRFDSQHKFV
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
ttgcaactcagagattaccaacgccaagccgtggatgcggccatcaaccactttaagcac
agtgatgactccgccctgctcgtgctcccgacaggggctggcaagagtatcgtcatcgca
gagcttgcccgcatcgccaaggggcgcactttggtgctcacccacgtcaaggagctggtg
gcgcaaaacgccgagaaagttggattactgaccgatgaggccagtatcttttccgcgggg
ctgaaacaaaaatcgacccgcaacaagacggtggtggccagcattcaatcggcggtgcgt
aaccccaagcagtttgatgagccctattcgctggtgatcatcgatgagtgtcaccgggtc
tccaatgagaaagagagccagtatcagcagctgcttagtcatctaaggacgcagaatccg
aaactcaggctgctgggcctgacggcaaccccctatcgcctgggcagcggttggatctat
cgctatcactaccatggcaagattggcaataccgagcagccggtgttcgagcactgtatc
ttcgagttgccgatgcgcccgctcattaaacagggctttctgacaccgcccaaggtactt
gatggcctgtcggcccagtatgatttcagcgagctctcacccaatgccaacggtgaatac
aatgaggccgaagtcgactctctgctggatcacgcgggccgcgccaccaaggcgattgtg
gagcagataaaacagctcaccaacacccgcgccggcactatcatcttcgcggcgaccgtg
cgtcatgccaaagagatcatgaccctactggacagccccgaggcggggctaatcaccgca
gatacaccaagccaggagcgcgatgccattatcgatgccttcaaacgccgcgagctcagc
tacctggtcaatgttgcggtactcaccacgggcttcgacgccccccatgtggatcttatc
gccatcttgcggcccacggcatcggtgagcctgttccagcagatggtcggccggggcttg
aggatctgcgaaggcaagcgggattgcttagtgatcgactacgccgccaacggcttcgac
ctcttctttcccgaagttggccgtcccaaacccgacagcaagagcgtgccggtgcaagtc
ccctgccccgaatgtggctttgccaacattttctgggggctggtagacggtgatggcgat
attatcgagcacttcggacgacgctgtcaggccgtggtcgatgacggcgatagcaagcac
caatgcgactttcgatttcgctccaaggcctgcccaaattgcggtgaagagaacgatatt
gccgccaaggtgtgccaacattgtcagtcaacgctaatcgatcccgacaagcgtcttaaa
gaggtgctacaacagaaacatcatcacctgttccgttgccaggagatgctgtttgaggcc
gacaacgacaggctcagggtgcgttacctggatatcgagggcaacgatttctgctgttac
ttcaattttgccaccaaggcgcagatccgcgccttctatggcgtctttgtgcatcaacac
acacgcacaccaggccagaaacaacccacctttagcaaggtcgaccaggtgatcgccgcg
cgggaccattttcgtatgccggatctgctgctcctcaagaagggcaaacgcggctgggaa
cttgtcgagcgtttcttcgactatcggggccgattcgatagccagcataagtttgtatga
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