Shewanella spartinae: K0I31_16490
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Entry
K0I31_16490 CDS
T09209
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspa03000
]
K0I31_16490
Transcription factors [BR:
sspa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0I31_16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
GerE
Motif
Other DBs
NCBI-ProteinID:
QYJ93177
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Position
3806359..3807306
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AA seq
315 aa
AA seq
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MSKQSIIPKAITEYDLRLLRIFRTVVENGGFAAAENELGVTRSTISVHMSNLESRMKLKL
CSRGRGGFALTEAGQAVYHACIELFDSLNDFSMFVNNLGEELIGELVILCADQLDYGMQQ
KLAQVIAYIHQRQPQLHLILDGEALHQIEKSLLQDKAHVGLLPSYQQIQGLNYQTIFSEP
IYLCCSAKHPYFHLSDEEISAEMLAKTPSIHPGVDIDPEGREQLKRLNLSAKAYQFDTRK
TLILSGCYIGYLPLSYIQEELKQQEIKIIHGDEACYQFNLSMVVKQSARESAKVELLTQA
FNEVFGLDKPRGEQR
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacagtccatcatccctaaggcgatcaccgaatacgatctcagattactgcgc
atctttcgtaccgtggtcgagaatggtggcttcgccgccgcagagaatgaactcggggtc
acccgctccaccatcagcgtacacatgtctaaccttgagagtcgcatgaagctcaagctg
tgtagccggggacggggcggatttgccctcacggaggctggccaggccgtgtatcacgcc
tgtatcgaactattcgattccctcaacgatttctcgatgtttgttaacaacttgggggaa
gagttgatcggcgaactggtgatcctctgcgccgatcagctggactacggcatgcagcag
aagctggcccaggtgatcgcctacatacaccaacgccagccccagctacaccttattcta
gacggcgaggcgctgcaccagattgagaagtcgctgctacaggacaaggcccacgtcggc
ctcttgcccagctatcaacagatccagggcctcaactatcagaccatcttcagcgagccc
atctacctgtgttgcagcgccaagcatccctactttcatctgagcgacgaggagatcagc
gccgagatgctggccaagaccccctctatccacccaggcgtcgatatcgaccccgagggc
agagagcagctcaaacgcctcaacctgtcggccaaggcgtatcagtttgatactcgtaaa
accttaattctatcgggttgctacataggttacctgcccctgagctacattcaggaggag
ctgaaacagcaggagatcaagatcattcacggggatgaggcctgttaccagttcaacctc
tccatggtagtcaagcagtcggcgcgggagagcgccaaggtagagctgctgacccaggcc
ttcaacgaagtgtttggcctggataagccacgaggcgagcagagataa
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