Sphingobacterium spiritivorum: I6J01_04260
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Entry
I6J01_04260 CDS
T07566
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi01501
beta-Lactam resistance
sspi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I6J01_04260
01503 Cationic antimicrobial peptide (CAMP) resistance
I6J01_04260
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspi02000
]
I6J01_04260
01504 Antimicrobial resistance genes [BR:
sspi01504
]
I6J01_04260
Transporters [BR:
sspi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
I6J01_04260
Antimicrobial resistance genes [BR:
sspi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
I6J01_04260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF
Z1
Motif
Other DBs
NCBI-ProteinID:
QQT36655
LinkDB
All DBs
Position
complement(1013802..1016900)
Genome browser
AA seq
1032 aa
AA seq
DB search
MSISSLSIKKPVLAGVFSLLIVILGVVGWKQLGIREFPLTEPPVISVVTFYPGASPDVIA
SKITRPMEESIAEANGIRTISSESREQVSVISIEFNREMDIEDALNDVRDKVSKARKQLP
ADVDPPIVQKASSPDNLVAFLEVESDTKDIKEVSHIASTVIKDRVQSIPGINNVAIVGEH
KYAMRLRFDPIKLAAYKLTPEDIRQALLRENIDVPSGRVEGNNSELSIRTLGRLTTENDF
AEMIVKQTENAVIRLKDVGSAELGEMNERTAIINETGNLNRVGIGVAIQIQRGANAIQVV
DEFYKRLEQLRKDIPSEYRLIVGFDFTQSVRESIKEVEETLFIAFGLVVIIIFLFLRDWR
STIIPVIAIPVSILSAFFIMYVSGFSINVLTLLGLVLAIGLVVDDAIVVLENIYKKIEEG
MPPIQAAFKGSKEIYFAVISTTITLAAVFLPIVFMGGISGQLFKEFAIVVSGSVLVSAFV
ALTLTPMLSAYFLKKKEGPGWFYRVTEPFFVRMNNGYAHLLKAFMRARWLAWIFLIVTTG
LIYFVGKKLPSELAPIEDRSNMSLIAIAPEGVSFDYMKKHMIEVGKYVNDSTDGLYQTYS
MVAISFIPAPAPVNVAVQSIYLKDPKERKASIQDLYNQYGAASANFRGFLLFPYLPPTIG
SRYGGGMPVQFVLQAQDLDTLTAALPKFLNAVRQSKKLMFADADLKINKPEIKINIDRQK
AALMGVSIEEVARTLQLSLSGLRYAYFLRNDRQYEVIGQMKRELRNDITDLNSIYVRSNN
GQLIPLNNLITTEEAVSPAAIYRYDQFTSATVSAAPAPGVSLAEGIQEIERIKTEVLGDN
FKTSLAGQSRDYRESQGNIAFTLILALVIIYMILAAQFESLRDPLTIMLTVPMAVTGAIL
SLHWFGQSLNVFSQIGIITLVGLITKNGILIVEFANHLKDTGLSKFEAAIQAAEQRFRPI
LMTSLAMIFGALPIALTANSRQSLGIVIAGGLVFSGILTLFIIPAVYSYLSSSKRRKEVV
EMEDSEIETSHE
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgagtatatcatctttaagcataaaaaagccggttttagccggtgtattttccctcctg
attgtcattttgggcgttgttggatggaaacaactggggattcgggaattcccgctaaca
gaaccgcccgttatttccgttgtcactttttatccgggagcaagtcctgatgtaatcgcg
tctaagattacgcggcctatggaagaatccatagccgaggcaaacgggatacgtaccata
tcctccgaatctagagaacaggtaagcgttatttcgatagaatttaatcgggagatggat
atcgaagatgccctgaatgatgtgagagataaagtctcaaaagcacgtaaacagcttccg
gcggatgtagatccgcccatcgtacaaaaagcttcctctcccgacaatcttgtagccttt
ctcgaagttgaaagtgataccaaagatattaaagaagtaagccatatcgcttctactgtt
atcaaagatcgtgtgcaatccattcccggtatcaataatgtcgcgatcgtaggagagcat
aaatacgctatgcgtttgcgctttgacccgataaaactggcggcgtataaacttactccg
gaagatatccgtcaggcattgttacgggagaatatagatgttccgtccggtcgggtagaa
ggaaataacagtgagctgagtatacggacgctgggcaggctgactacagaaaatgatttc
gctgaaatgattgtcaaacagactgaaaacgcagttatccggctcaaagatgtcggttcg
gcagagctgggagaaatgaatgaacgtacagcgatcatcaatgaaacaggaaacctcaat
cgtgtcggtatcggtgtcgctatacagatacagcgaggagccaatgctattcaggtagtg
gatgaattttacaaacgtcttgagcaattacgcaaagatattccatcagagtaccgcctt
attgtggggttcgactttacacaatccgtacgcgaatccatcaaagaggtagaagagaca
ctcttcatcgcctttggtctggtagtcattattatctttctgtttctgagagactggcgt
tctactattatccccgttatcgctatcccggtatctatcctgtcggcctttttcattatg
tatgtttcaggcttttccatcaatgtcttgaccttgcttggactggtactcgccatagga
ctggtggtggatgatgcaatcgtagtacttgaaaatatttataaaaaaatagaagagggc
atgccgccgatacaggcagcctttaagggttccaaagaaatatattttgccgttatctct
acgactataacattggcggctgtattcttacccattgtatttatgggtggtatcagcggt
cagttattcaaagaatttgctatagttgtttccggttcagtattagtgtcggcattcgtt
gctcttacgctgactcctatgcttagcgcctattttcttaaaaagaaagaaggtccggga
tggttttaccgggttaccgaacctttctttgttcgcatgaataatggatatgctcatttg
ctcaaagcctttatgcgtgccagatggctggcatggatattcctgattgtcactacaggg
cttatttattttgtaggtaaaaaattaccttctgagcttgctccgatagaagacagatcc
aatatgagccttattgccatagcgcctgaaggagtttctttcgattatatgaaaaaacat
atgatcgaagtcggtaaatatgtgaatgactctacagacggactttatcagacttattca
atggttgcgatatccttcattccggcacctgcgcccgttaatgttgctgtacaaagtatc
tatctgaaagatcctaaagaaagaaaagccagcatacaggatttatataatcaatatgga
gcggcttcagccaatttcagaggatttctcttattcccttacctgccacctaccattggt
tcgcgttatggaggaggtatgcccgtacaatttgtattacaggctcaggatctggatact
ctcactgcagcacttccgaaatttctgaatgcggtacgccaaagtaaaaaactgatgttt
gctgatgcagatctaaaaatcaacaaaccagaaataaaaatcaacattgacaggcaaaaa
gccgcccttatgggggtttccatagaagaagttgcccgtacattgcagctgtcactctcc
ggattacgctacgcctatttcctgcgtaatgacaggcaatatgaagtcatcggacaaatg
aaacgtgaactgcgaaatgatattactgatcttaattccatatatgtacgctctaacaac
ggacaattgatccctctcaacaatctcattactacggaagaggctgtaagtcctgcagct
atataccgttatgatcagttcacctctgctaccgtatcagcagctccggctcctggtgtg
agtcttgcagaaggtatacaagaaatagaacgaataaaaacggaagtactgggtgataac
ttcaaaacgtcattagccggccagtctcgtgactatagagaaagccagggtaacatagct
ttcacactaatactcgctctggtgattatctacatgattctggccgcacaatttgagagt
ctgcgtgacccgctgaccattatgcttaccgtaccgatggcggtcacaggagctatcctc
agcctccattggttcggtcaaagccttaacgtattcagccagataggtattatcacactg
gtagggctcattacgaaaaatggtatcctgatcgtagagtttgctaatcacctcaaagac
accgggctgtctaaatttgaggctgcgatacaggccgcagaacagcggtttcgtcctatc
ctgatgacctcgcttgccatgatattcggtgcgctgcctattgcactgactgccaacagc
cgtcagtcgctgggaatagttatcgcaggaggattagtgttttcaggtatactcacgcta
tttattataccggccgtatactcttatctgtccagtagcaaacgtagaaaagaagtcgta
gaaatggaagatagtgaaatagaaactagccatgaataa
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