Sphingobacterium spiritivorum: I6J01_09335
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Entry
I6J01_09335 CDS
T07566
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6J01_09335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspi03021
]
I6J01_09335
Transcription machinery [BR:
sspi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J01_09335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
GerE
HTH_38
HTH_24
HTH_17
HTH_10
HTH_11
HTH_DeoR
UPF0122
HTH_30
Rv2175c_wHTH
GntR
Sigma70_r3
HTH_20
DUF5844
HTH_AsnC-type
HTH_5
HTH_Tnp_ISL3
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QQT37585
LinkDB
All DBs
Position
2224556..2225125
Genome browser
AA seq
189 aa
AA seq
DB search
MKLTQQHIEQEIAGQFREFYLEYKDKVYRYALIHLREESQALDIVQEVFSKIWIRFEELD
KNQNIKAYLYTVARNTVFDELRKIKIKHNYANTEGQRLPAVDNSNAEHIAFKDLEKVYQQ
AILQLPSERQRIYLLSKIEYLSNAEIADQLGISVNTVRDQLVKANKSVRAFILSHFEMSI
TILIFLRIL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaacgcagcaacatattgaacaggagatagctggccaattcagggaattctat
ttggagtataaggacaaagtatataggtatgcccttatacatctgcgggaagaaagccag
gcgttagatattgtgcaggaagtcttttctaaaatctggatccggtttgaggagctggat
aagaatcaaaatataaaagcttatctctataccgtagcccgaaatacggtatttgatgaa
ctccggaaaataaaaattaaacataactacgcaaatacagaaggacaacggctccccgct
gttgataattccaatgcagaacatattgccttcaaggatctggaaaaggtatatcagcaa
gctattctgcaattaccttccgaacgtcagcggatatacctgctgagtaagatagaatat
ctttccaatgctgaaatcgcagaccaactgggcatttcagtcaacacagtacgtgatcaa
ctcgtcaaagccaacaaatctgttcgtgcttttatactctcccattttgaaatgtctatt
accattttgattttcttaagaattttataa
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