Sphingobacterium spiritivorum: I6J01_20820
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Entry
I6J01_20820 CDS
T07566
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sspi
Sphingobacterium spiritivorum
Pathway
sspi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sspi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I6J01_20820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sspi03021
]
I6J01_20820
Transcription machinery [BR:
sspi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I6J01_20820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
UPF0122
HTH_24
HTH_11
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QQT35670
LinkDB
All DBs
Position
4935420..4935929
Genome browser
AA seq
169 aa
AA seq
DB search
MKLRKRSDIHLIEAYFEQYYEMLCKVAFQYVKDHQEAEDIVQDFFYLLWQKNRAEKIEGK
FEHYAVRSIRNNCLNVLKKKQLPIQDISSDFYNLGEDHDDMELRIAYEQRLEDVAASIQL
LPDRQREAIDMNIWGDLKYQEISDRLQVSINTVKTHIKLAYKNLRRLNS
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgcaagagatcagacatacatttgattgaagcatattttgaacaatactat
gaaatgttatgcaaagtagcgttccaatatgtgaaggatcatcaggaagctgaggatatt
gttcaggactttttctacctgctgtggcaaaagaatagagcagagaaaatcgaagggaag
tttgagcattatgcggtaagatctatccgcaacaattgtctcaatgtactgaagaagaaa
caactccctattcaggatatctcatcggatttttacaatctgggcgaagaccatgatgac
atggaacttcgtatagcctacgagcagcggctggaagatgtggctgcaagcatacaattg
ctgcctgacagacaaagggaggccatcgatatgaatatttggggcgatctcaaatatcag
gagatttcggatagactacaggtttcgatcaacacagtcaaaacccatataaagcttgcc
tataaaaatcttcgcagactcaattcctga
DBGET
integrated database retrieval system
