KEGG   Salvia splendens (scarlet sage): 121746381
Entry
121746381         CDS       T07627                                 
Name
(RefSeq) histone deacetylase 9-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
sspl  Salvia splendens (scarlet sage)
Pathway
sspl03082  ATP-dependent chromatin remodeling
sspl03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sspl00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    121746381
   03083 Polycomb repressive complex
    121746381
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sspl03036]
    121746381
Enzymes [BR:sspl01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     121746381
Chromosome and associated proteins [BR:sspl03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     121746381
   HDAC complexes
    Sin3A-HDAC complex
     121746381
    BRAF-HDAC complex
     121746381
    REST complex
     121746381
    SHIP complex
     121746381
    MiDAC complex
     121746381
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     121746381
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    121746381
  Chromatin remodeling factors
   NuRD complex
    121746381
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 121746381
NCBI-ProteinID: XP_041996122
LinkDB
Position
1:27972408..27978672
AA seq 432 aa
MRTKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYELHNKMEIYRPHKAYPVEL
AQFHSPDYVEFLQRISPDKQQLFANEMAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEKEGKNYAINVPLRDGIDDGSFLRLFKM
IILKVVECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGALLGVELASEIPENEYFKYFAPDYSLKCASGHMENLNSKSYLNNIR
QQVCENLSAIQHAPGVQMQEVPPDFYIPELDEDEQNPDERVNRQMQDKHVQRDDEYYEGD
NDNDNDQNNDGT
NT seq 1299 nt   +upstreamnt  +downstreamnt
atgcgcaccaaagacaggatttcctatttctatgacggggatgtggggaacgtttatttc
gggcctaatcatccaatgaagccgcaccgtttgtgcatgacgcaccatttggttctggcg
tatgagcttcacaataagatggaaatctataggcctcacaaggcttatcctgtggagcta
gctcagttccattctccggattatgttgagtttctgcagcgaatctctcctgacaagcaa
cagctctttgctaatgagatggccaaatataatcttggtgaagattgtccagtctttgag
aatctgtttgagttctgtcaaatttatgctggcggtacattagatgctgcacggagatta
aataatcggttgtgtgatattgccataaattgggctggtggattgcatcatgcaaagaag
tgcgaggcatctgggttctgttacatcaatgaccttgtgttgggaattctggagctcttg
aagtaccatgctcgtgtgttatatattgatattgatgtccaccatggtgatggggtggaa
gaagccttttactttactgatagggtgatgacagttagtttccacaagtacggtgacttg
ttctttcctggaacaggtgatgtcaaggatgttggagaaaaagaaggcaaaaattatgct
ataaatgtacctcttagggatggaatagatgacgggagcttcttacgtctctttaaaatg
atcattttgaaagttgttgagtgctatgctcctggagccattgttctccaatgtggagca
gattcacttgccggggacagattgggatgcttcaacctttctattgatggtcatgcagct
tgtgtgaagtttgtcaagcaacttaatttgcctttgctggtaactggaggtgggggatac
accaaagagaatgtggccagatgttggactgtggagacaggggcacttctaggtgtggag
ctcgctagtgagataccagaaaatgagtacttcaaatattttgctccggattactcgttg
aaatgtgcaagcgggcatatggagaatttgaacagcaaatcataccttaacaacatccga
caacaagtttgtgaaaatcttagtgccattcaacatgctcctggcgtacaaatgcaagag
gtgcctccggatttttatattcctgaacttgatgaggatgagcagaatcctgatgaacgc
gtaaatcgacaaatgcaagacaagcatgttcagcgtgatgacgaatattatgaaggtgac
aatgacaatgacaatgatcagaacaacgatggtacgtag

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