Salvia splendens (scarlet sage): 121746381
Help
Entry
121746381 CDS
T07627
Name
(RefSeq) histone deacetylase 9-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03082
ATP-dependent chromatin remodeling
sspl03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
121746381
03083 Polycomb repressive complex
121746381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sspl03036
]
121746381
Enzymes [BR:
sspl01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
121746381
Chromosome and associated proteins [BR:
sspl03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
121746381
HDAC complexes
Sin3A-HDAC complex
121746381
BRAF-HDAC complex
121746381
REST complex
121746381
SHIP complex
121746381
MiDAC complex
121746381
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
121746381
Heterochromatin formation proteins
Other heterochromatin formation proteins
121746381
Chromatin remodeling factors
NuRD complex
121746381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
121746381
NCBI-ProteinID:
XP_041996122
LinkDB
All DBs
Position
1:27972408..27978672
Genome browser
AA seq
432 aa
AA seq
DB search
MRTKDRISYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLAYELHNKMEIYRPHKAYPVEL
AQFHSPDYVEFLQRISPDKQQLFANEMAKYNLGEDCPVFENLFEFCQIYAGGTLDAARRL
NNRLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKYGDLFFPGTGDVKDVGEKEGKNYAINVPLRDGIDDGSFLRLFKM
IILKVVECYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAACVKFVKQLNLPLLVTGGGGY
TKENVARCWTVETGALLGVELASEIPENEYFKYFAPDYSLKCASGHMENLNSKSYLNNIR
QQVCENLSAIQHAPGVQMQEVPPDFYIPELDEDEQNPDERVNRQMQDKHVQRDDEYYEGD
NDNDNDQNNDGT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaccaaagacaggatttcctatttctatgacggggatgtggggaacgtttatttc
gggcctaatcatccaatgaagccgcaccgtttgtgcatgacgcaccatttggttctggcg
tatgagcttcacaataagatggaaatctataggcctcacaaggcttatcctgtggagcta
gctcagttccattctccggattatgttgagtttctgcagcgaatctctcctgacaagcaa
cagctctttgctaatgagatggccaaatataatcttggtgaagattgtccagtctttgag
aatctgtttgagttctgtcaaatttatgctggcggtacattagatgctgcacggagatta
aataatcggttgtgtgatattgccataaattgggctggtggattgcatcatgcaaagaag
tgcgaggcatctgggttctgttacatcaatgaccttgtgttgggaattctggagctcttg
aagtaccatgctcgtgtgttatatattgatattgatgtccaccatggtgatggggtggaa
gaagccttttactttactgatagggtgatgacagttagtttccacaagtacggtgacttg
ttctttcctggaacaggtgatgtcaaggatgttggagaaaaagaaggcaaaaattatgct
ataaatgtacctcttagggatggaatagatgacgggagcttcttacgtctctttaaaatg
atcattttgaaagttgttgagtgctatgctcctggagccattgttctccaatgtggagca
gattcacttgccggggacagattgggatgcttcaacctttctattgatggtcatgcagct
tgtgtgaagtttgtcaagcaacttaatttgcctttgctggtaactggaggtgggggatac
accaaagagaatgtggccagatgttggactgtggagacaggggcacttctaggtgtggag
ctcgctagtgagataccagaaaatgagtacttcaaatattttgctccggattactcgttg
aaatgtgcaagcgggcatatggagaatttgaacagcaaatcataccttaacaacatccga
caacaagtttgtgaaaatcttagtgccattcaacatgctcctggcgtacaaatgcaagag
gtgcctccggatttttatattcctgaacttgatgaggatgagcagaatcctgatgaacgc
gtaaatcgacaaatgcaagacaagcatgttcagcgtgatgacgaatattatgaaggtgac
aatgacaatgacaatgatcagaacaacgatggtacgtag
DBGET
integrated database retrieval system