Salvia splendens (scarlet sage): 121753640
Help
Entry
121753640 CDS
T07627
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 16
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
121753640
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sspl04040
]
121753640
Ion channels [BR:
sspl04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
121753640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Endotoxin_N
Motif
Other DBs
NCBI-GeneID:
121753640
NCBI-ProteinID:
XP_042004805
LinkDB
All DBs
Position
11:complement(27686766..27689493)
Genome browser
AA seq
667 aa
AA seq
DB search
MMNNLRVVPFPAGSSILHEHQQQQEWWRQVLDPGGEIVNRWNRIFFAICMIALYIDPLFF
YLIRLDPHHNCLSMEYHLAAFLVPTRTLVDLFSAFHILLKFRTAYIAPNSTVFGRGDLVT
DTNLIASRYLKRNFAIDLAAALPLPQCVVWGIMPMTIARTSNHVNHTISLLIILQYIPRL
IIIFPLNWRIIKNTGVVAKTAWTGAAYNLILYLLASHALGAIWYLLSVERIYSCWRDYCA
LEGRSVCNTGYFDCLSMLPGHDAWHNSTLVFQRCDGQTGVYNFGMFEIALYDHIASVNFF
EKYFYCMWFGLKSLSSYGQSMEASAKVTETIFGILVCIMGLLFFSLLIGNVQTYLQSTTA
RLEEWRVKRRDTEEWMQHRQLPPNLQERVRRFVQYNWLSTRGVKEEEILQELPLDIRREV
QKHLCLDLVRRVPFFSKMDNQLLDAICQRLVSSLNTRGTFIVREGDPVNEMLFIIRGQLE
SSTTDGGRSGFFNSITLKVGDFCGEELLNWALMATSHLNLPASTRTVKCITEVEAFALRA
DDLKFFAAQFKRLHSKRLQHSFRYYSHQWRTWGACILQAAWRRFRRRRLADELSRQESML
SLQDVDYGDDDDDPSHRGSSALTASLLAKRFAKKAKRGTSTLRKLKILAGESTSPIPKLF
KPDEPTF
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaatctccgggtggtcccattcccggcgggaagctcgatcctccacgagcac
cagcagcagcaagaatggtggcgtcaggtcctcgatccgggcggcgaaatcgtgaaccga
tggaaccgcatcttcttcgccatctgcatgatcgccctctacatcgatcccctcttcttc
tacctgatccgcctggatccccaccacaactgcctcagcatggaataccacctcgccgcc
ttccttgtccccacccgcaccctcgtcgacctcttctccgccttccacatcctcctcaag
ttccgcaccgcctacatcgcccccaactccaccgtcttcggccgcggcgacctcgtcacc
gacaccaacctcatcgcctcccgatacctcaaacgcaacttcgccatcgacctcgccgcc
gccctccccctcccccagtgcgttgtctggggcatcatgccgatgacaattgctcggacc
agcaaccatgtcaaccacaccatctctctgctgatcatccttcagtacatcccccgcctc
atcatcatcttccctctcaactggcggatcatcaagaacactggcgtcgtcgccaagact
gcttggaccggagcggcctacaatctcattctctacttgctagcaagccatgctctggga
gcaatatggtatttattgtccgtggaaagaatctattcgtgctggagagattactgcgca
ctggaagggcgatccgtttgcaacactggctatttcgattgcttgtcgatgctccctggg
catgacgcttggcataactccaccctcgtcttccagagatgcgatggccagactggcgtt
tacaattttggaatgttcgagattgctttgtatgatcatattgcttctgtcaatttcttc
gagaagtacttttattgtatgtggtttgggttgaaaagtttgagctcgtatggacagagt
atggaggcgagtgctaaggtaactgagacaatatttgggattcttgtttgcataatgggc
ctcctcttcttctcgcttctcataggcaatgttcagacgtatctgcaatctacaacagca
agacttgaagaatggagagtgaaaagacgagacaccgaggaatggatgcaacaccggcag
ctcccgcccaatctgcaggagcgcgtcaggcggttcgtccagtacaactggctctccacc
agaggcgtcaaggaagaagagattctccaggagttgcccctagacatccgccgcgaagtc
caaaagcatctctgtctggatctcgttcgccgcgtccctttcttttcgaagatggacaac
caactcttggacgcgatatgccagcgcctggtctcatccctcaacaccagaggcacgttc
atcgtgcgcgagggcgatccagtgaacgagatgctcttcataatccgggggcagctggag
agctccaccacggacggcggccgctcggggttcttcaactccataaccctgaaggtcggc
gacttctgcggcgaggagcttctgaactgggccctgatggccacatcccacctcaacctc
ccggcctccacgcggacggtaaagtgcatcaccgaggtggaggctttcgccctgcgcgcg
gacgacctaaagttcttcgcggcgcagttcaagcgcctccacagcaagcggctgcagcac
tcgttccgctactactcccaccagtggcggacatggggcgcgtgcatcctgcaggccgct
tggaggcgcttccgcaggaggaggctcgctgatgagctctccaggcaggagagcatgctg
agtttgcaggatgtagactacggtgacgacgacgatgacccctcccaccgcgggagcagt
gcactcactgcgtctctcttggctaagagatttgccaagaaagcgaagagagggacatcc
actcttaggaagcttaaaattcttgctggagagtccacttcgccaatacctaagctcttt
aagcctgatgagcctactttctga
DBGET
integrated database retrieval system
