Salvia splendens (scarlet sage): 121762318
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Entry
121762318 CDS
T07627
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
sspl
Salvia splendens (scarlet sage)
Pathway
sspl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sspl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
121762318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sspl03019
]
121762318
Messenger RNA biogenesis [BR:
sspl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
121762318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121762318
NCBI-ProteinID:
XP_042014093
LinkDB
All DBs
Position
13:2468211..2470331
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AA seq
372 aa
AA seq
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MDDSEQNKLFVGGISWDTTDDALKDHFGQYGAVFGSVIARDRISGNPRGFAFVTFSDSSA
VDRALQDSHQILSRTVEVKRAIPRSEQQSQQQNYRGVSRNNSRTNNRSDVQFRTKKIFVG
GLSANLTEEEFRRYFEKFGRITDVVVMHDNLTHRPRGFGFITFDSEDSVEEVMQKSFHEL
TGKLVEVKRAVPKDGIGSSNIVYNGRLGDARSPTSFNSYQQGSYVPVNSRYGYFPGYGNV
AGYLYGAGMYGGVYPSGGYGGISYGLTPIAPRSPWNSAMIGVRGGFLPYGSAAPVYPSYV
NGGPGGVLGLSMNGYGGILGGDAQHSTESTPSQTGINNVDANSFGSSRGFGGAASKQSHR
VSDRSYQAANSS
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcggagcagaataagctgtttgtcgggggcatttcgtgggacacgacggac
gatgccctcaaggaccatttcggccagtacggcgccgtttttggatccgtgattgctcgg
gatcgtatttccggtaaccccaggggcttcgccttcgtcaccttctcggattcttccgcc
gtcgaccgcgctcttcaggattcccatcaaattcttagcagaacggttgaagtgaagagg
gctattcccaggagcgaacaacaaagtcaacaacagaactataggggagtgagtaggaat
aacagtaggactaacaataggagcgacgtgcagtttaggacgaaaaagattttcgtaggg
ggtttgtcggctaacttgactgaggaagaattcagaagatactttgagaagtttggtagg
attactgatgtagttgtgatgcatgacaatctgactcataggccgaggggatttggtttt
attacctttgattcagaggattcggttgaggaagttatgcagaagagcttccatgagttg
actggaaagcttgtcgaggttaaaagagctgttccaaaggatggaattggcagtagtaac
attgtttataatggaaggttaggcgatgcaagaagccctactagcttcaattcttatcag
caggggagttacgtgcctgtaaattctagatatgggtatttccctggatatggtaatgtg
gctgggtacctatacggagctgggatgtatggtggtgtttatccctctggagggtatggt
ggaattagttacggactcactccaattgccccaaggagtccttggaattcagcgatgatt
ggtgtcaggggaggtttcctgccttatggaagtgccgctcctgtctatccctcttatgtg
aatggcggacctggaggagtattgggactgtctatgaacggatatggtgggatattgggt
ggagatgctcaacactcgactgagtcaacaccctctcagactggtataaataatgtagat
gccaattcttttggttccagtagaggtttcggaggtgcagctagcaaacagagtcataga
gttagtgataggtcttaccaagctgctaactcaagctga
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